Protein–RNA interactions for Protein: P0DP91

CSB-PGBD3, Chimeric ERCC6-PGBD3 protein, humanhuman

Predictions only

Length 1,061 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSB-PGBD3P0DP91 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC27.15■■□□□ 1.94
CSB-PGBD3P0DP91 EXOC3-AS1-202ENST00000623673 1663 ntBASIC27.15■■□□□ 1.94
CSB-PGBD3P0DP91 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC27.15■■□□□ 1.94
CSB-PGBD3P0DP91 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC27.15■■□□□ 1.94
CSB-PGBD3P0DP91 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC27.15■■□□□ 1.94
CSB-PGBD3P0DP91 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC27.15■■□□□ 1.94
CSB-PGBD3P0DP91 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC27.15■■□□□ 1.94
CSB-PGBD3P0DP91 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC27.15■■□□□ 1.94
CSB-PGBD3P0DP91 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC27.15■■□□□ 1.94
CSB-PGBD3P0DP91 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC27.15■■□□□ 1.94
CSB-PGBD3P0DP91 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC27.15■■□□□ 1.94
CSB-PGBD3P0DP91 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC27.14■■□□□ 1.94
CSB-PGBD3P0DP91 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC27.14■■□□□ 1.94
CSB-PGBD3P0DP91 SAPCD2P4-201ENST00000424595 1171 ntBASIC27.14■■□□□ 1.94
CSB-PGBD3P0DP91 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC27.14■■□□□ 1.94
CSB-PGBD3P0DP91 AP003071.4-201ENST00000562276 1284 ntBASIC27.14■■□□□ 1.94
CSB-PGBD3P0DP91 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC27.14■■□□□ 1.94
CSB-PGBD3P0DP91 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC27.14■■□□□ 1.94
CSB-PGBD3P0DP91 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC27.14■■□□□ 1.93
CSB-PGBD3P0DP91 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC27.14■■□□□ 1.93
CSB-PGBD3P0DP91 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC27.13■■□□□ 1.93
CSB-PGBD3P0DP91 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC27.13■■□□□ 1.93
CSB-PGBD3P0DP91 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC27.13■■□□□ 1.93
CSB-PGBD3P0DP91 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC27.13■■□□□ 1.93
CSB-PGBD3P0DP91 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC27.13■■□□□ 1.93
CSB-PGBD3P0DP91 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC27.13■■□□□ 1.93
CSB-PGBD3P0DP91 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC27.13■■□□□ 1.93
CSB-PGBD3P0DP91 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC27.13■■□□□ 1.93
CSB-PGBD3P0DP91 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC27.13■■□□□ 1.93
CSB-PGBD3P0DP91 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC27.13■■□□□ 1.93
CSB-PGBD3P0DP91 MFF-203ENST00000349901 1716 ntTSL 2 BASIC27.13■■□□□ 1.93
CSB-PGBD3P0DP91 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC27.13■■□□□ 1.93
CSB-PGBD3P0DP91 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC27.12■■□□□ 1.93
CSB-PGBD3P0DP91 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC27.12■■□□□ 1.93
CSB-PGBD3P0DP91 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC27.12■■□□□ 1.93
CSB-PGBD3P0DP91 AL355355.2-201ENST00000442321 338 ntBASIC27.12■■□□□ 1.93
CSB-PGBD3P0DP91 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC27.12■■□□□ 1.93
CSB-PGBD3P0DP91 AL353708.3-201ENST00000610272 989 ntBASIC27.12■■□□□ 1.93
CSB-PGBD3P0DP91 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC27.12■■□□□ 1.93
CSB-PGBD3P0DP91 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC27.12■■□□□ 1.93
CSB-PGBD3P0DP91 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC27.12■■□□□ 1.93
CSB-PGBD3P0DP91 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC27.12■■□□□ 1.93
CSB-PGBD3P0DP91 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC27.11■■□□□ 1.93
CSB-PGBD3P0DP91 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC27.11■■□□□ 1.93
CSB-PGBD3P0DP91 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC27.11■■□□□ 1.93
CSB-PGBD3P0DP91 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC27.11■■□□□ 1.93
CSB-PGBD3P0DP91 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC27.11■■□□□ 1.93
CSB-PGBD3P0DP91 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC27.11■■□□□ 1.93
CSB-PGBD3P0DP91 HES2-206ENST00000489730 730 ntTSL 2 BASIC27.11■■□□□ 1.93
CSB-PGBD3P0DP91 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC27.11■■□□□ 1.93
CSB-PGBD3P0DP91 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC27.11■■□□□ 1.93
CSB-PGBD3P0DP91 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC27.11■■□□□ 1.93
CSB-PGBD3P0DP91 STK25-205ENST00000405883 1904 ntTSL 2 BASIC27.11■■□□□ 1.93
CSB-PGBD3P0DP91 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC27.11■■□□□ 1.93
CSB-PGBD3P0DP91 HTR7P1-201ENST00000538670 1336 ntBASIC27.11■■□□□ 1.93
CSB-PGBD3P0DP91 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC27.11■■□□□ 1.93
CSB-PGBD3P0DP91 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC27.11■■□□□ 1.93
CSB-PGBD3P0DP91 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC27.1■■□□□ 1.93
CSB-PGBD3P0DP91 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC27.1■■□□□ 1.93
CSB-PGBD3P0DP91 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC27.1■■□□□ 1.93
CSB-PGBD3P0DP91 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC27.1■■□□□ 1.93
CSB-PGBD3P0DP91 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC27.1■■□□□ 1.93
CSB-PGBD3P0DP91 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC27.1■■□□□ 1.93
CSB-PGBD3P0DP91 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC27.1■■□□□ 1.93
CSB-PGBD3P0DP91 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC27.1■■□□□ 1.93
CSB-PGBD3P0DP91 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC27.1■■□□□ 1.93
CSB-PGBD3P0DP91 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC27.1■■□□□ 1.93
CSB-PGBD3P0DP91 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC27.1■■□□□ 1.93
CSB-PGBD3P0DP91 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC27.1■■□□□ 1.93
CSB-PGBD3P0DP91 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC27.09■■□□□ 1.93
CSB-PGBD3P0DP91 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC27.09■■□□□ 1.93
CSB-PGBD3P0DP91 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC27.09■■□□□ 1.93
CSB-PGBD3P0DP91 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC27.09■■□□□ 1.93
CSB-PGBD3P0DP91 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC27.09■■□□□ 1.93
CSB-PGBD3P0DP91 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC27.09■■□□□ 1.93
CSB-PGBD3P0DP91 TMPOP1-202ENST00000424642 1267 ntBASIC27.09■■□□□ 1.93
CSB-PGBD3P0DP91 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC27.09■■□□□ 1.93
CSB-PGBD3P0DP91 GRAP-204ENST00000573099 846 ntTSL 3 BASIC27.09■■□□□ 1.93
CSB-PGBD3P0DP91 AF186192.3-201ENST00000583427 947 ntBASIC27.09■■□□□ 1.93
CSB-PGBD3P0DP91 RPS15-203ENST00000586096 570 ntTSL 2 BASIC27.09■■□□□ 1.93
CSB-PGBD3P0DP91 Six3os1_6.1-201ENST00000620790 196 ntBASIC27.09■■□□□ 1.93
CSB-PGBD3P0DP91 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC27.09■■□□□ 1.93
CSB-PGBD3P0DP91 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC27.09■■□□□ 1.93
CSB-PGBD3P0DP91 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC27.09■■□□□ 1.93
CSB-PGBD3P0DP91 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC27.09■■□□□ 1.93
CSB-PGBD3P0DP91 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC27.09■■□□□ 1.93
CSB-PGBD3P0DP91 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC27.09■■□□□ 1.93
CSB-PGBD3P0DP91 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC27.08■■□□□ 1.93
CSB-PGBD3P0DP91 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC27.08■■□□□ 1.93
CSB-PGBD3P0DP91 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC27.08■■□□□ 1.93
CSB-PGBD3P0DP91 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC27.08■■□□□ 1.93
CSB-PGBD3P0DP91 CD177P1-201ENST00000606252 935 ntBASIC27.08■■□□□ 1.93
CSB-PGBD3P0DP91 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC27.08■■□□□ 1.93
CSB-PGBD3P0DP91 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC27.08■■□□□ 1.93
CSB-PGBD3P0DP91 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC27.08■■□□□ 1.93
CSB-PGBD3P0DP91 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC27.08■■□□□ 1.93
CSB-PGBD3P0DP91 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC27.08■■□□□ 1.93
CSB-PGBD3P0DP91 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC27.08■■□□□ 1.93
CSB-PGBD3P0DP91 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC27.08■■□□□ 1.93
CSB-PGBD3P0DP91 TERT-206ENST00000508104 2486 ntTSL 5 BASIC27.08■■□□□ 1.93
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms