Protein–RNA interactions for Protein: P0CG48

UBC, Polyubiquitin-C, humanhuman

Known RBP Predictions only

Length 685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBCP0CG48 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
UBCP0CG48 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.44
UBCP0CG48 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC17.83■□□□□ 0.44
UBCP0CG48 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
UBCP0CG48 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
UBCP0CG48 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC17.82■□□□□ 0.44
UBCP0CG48 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
UBCP0CG48 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
UBCP0CG48 IRS3P-201ENST00000223076 1006 ntBASIC17.82■□□□□ 0.44
UBCP0CG48 NAA20-201ENST00000310450 920 ntTSL 2 BASIC17.82■□□□□ 0.44
UBCP0CG48 PTPA-214ENST00000423100 988 ntTSL 2 BASIC17.82■□□□□ 0.44
UBCP0CG48 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC17.82■□□□□ 0.44
UBCP0CG48 DUX4L2-201ENST00000561772 1275 ntBASIC17.82■□□□□ 0.44
UBCP0CG48 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
UBCP0CG48 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC17.82■□□□□ 0.44
UBCP0CG48 DUX4L6-201ENST00000626483 1275 ntBASIC17.82■□□□□ 0.44
UBCP0CG48 DUX4L1-201ENST00000627662 1275 ntBASIC17.82■□□□□ 0.44
UBCP0CG48 DUX4L8-201ENST00000629013 1275 ntBASIC17.82■□□□□ 0.44
UBCP0CG48 DUX4L3-201ENST00000630187 1275 ntBASIC17.82■□□□□ 0.44
UBCP0CG48 DUX4L7-201ENST00000630678 1275 ntBASIC17.82■□□□□ 0.44
UBCP0CG48 DUX4L5-201ENST00000630834 1275 ntBASIC17.82■□□□□ 0.44
UBCP0CG48 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
UBCP0CG48 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
UBCP0CG48 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
UBCP0CG48 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC17.82■□□□□ 0.44
UBCP0CG48 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
UBCP0CG48 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC17.82■□□□□ 0.44
UBCP0CG48 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC17.82■□□□□ 0.44
UBCP0CG48 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
UBCP0CG48 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
UBCP0CG48 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
UBCP0CG48 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
UBCP0CG48 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
UBCP0CG48 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
UBCP0CG48 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
UBCP0CG48 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC17.81■□□□□ 0.44
UBCP0CG48 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
UBCP0CG48 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
UBCP0CG48 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC17.81■□□□□ 0.44
UBCP0CG48 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
UBCP0CG48 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
UBCP0CG48 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
UBCP0CG48 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
UBCP0CG48 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC17.81■□□□□ 0.44
UBCP0CG48 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC17.81■□□□□ 0.44
UBCP0CG48 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
UBCP0CG48 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC17.81■□□□□ 0.44
UBCP0CG48 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
UBCP0CG48 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC17.81■□□□□ 0.44
UBCP0CG48 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
UBCP0CG48 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC17.81■□□□□ 0.44
UBCP0CG48 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC17.81■□□□□ 0.44
UBCP0CG48 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
UBCP0CG48 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC17.81■□□□□ 0.44
UBCP0CG48 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
UBCP0CG48 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC17.81■□□□□ 0.44
UBCP0CG48 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
UBCP0CG48 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
UBCP0CG48 LINC02228-203ENST00000641970 1355 ntBASIC17.8■□□□□ 0.44
UBCP0CG48 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
UBCP0CG48 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC17.8■□□□□ 0.44
UBCP0CG48 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC17.8■□□□□ 0.44
UBCP0CG48 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
UBCP0CG48 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
UBCP0CG48 MIR2861-201ENST00000636310 90 ntBASIC17.8■□□□□ 0.44
UBCP0CG48 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC17.8■□□□□ 0.44
UBCP0CG48 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
UBCP0CG48 PCDHAC2-203ENST00000615316 3011 ntBASIC17.8■□□□□ 0.44
UBCP0CG48 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
UBCP0CG48 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
UBCP0CG48 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
UBCP0CG48 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC17.8■□□□□ 0.44
UBCP0CG48 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC17.8■□□□□ 0.44
UBCP0CG48 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC17.8■□□□□ 0.44
UBCP0CG48 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
UBCP0CG48 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
UBCP0CG48 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
UBCP0CG48 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
UBCP0CG48 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
UBCP0CG48 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
UBCP0CG48 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
UBCP0CG48 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
UBCP0CG48 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
UBCP0CG48 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC17.79■□□□□ 0.44
UBCP0CG48 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC17.79■□□□□ 0.44
UBCP0CG48 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
UBCP0CG48 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
UBCP0CG48 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC17.79■□□□□ 0.44
UBCP0CG48 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC17.79■□□□□ 0.44
UBCP0CG48 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC17.78■□□□□ 0.44
UBCP0CG48 AL020996.1-203ENST00000536896 2307 ntBASIC17.78■□□□□ 0.44
UBCP0CG48 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
UBCP0CG48 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC17.78■□□□□ 0.44
UBCP0CG48 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
UBCP0CG48 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC17.78■□□□□ 0.44
UBCP0CG48 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
UBCP0CG48 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC17.78■□□□□ 0.44
UBCP0CG48 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC17.78■□□□□ 0.44
UBCP0CG48 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
UBCP0CG48 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 18.9 ms