Protein–RNA interactions for Protein: P0C0E4

RAB40AL, Ras-related protein Rab-40A-like, humanhuman

Predictions only

Length 278 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40ALP0C0E4 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
RAB40ALP0C0E4 UBE2SP1-201ENST00000450587 669 ntBASIC19.22■□□□□ 0.67
RAB40ALP0C0E4 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC19.22■□□□□ 0.67
RAB40ALP0C0E4 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
RAB40ALP0C0E4 SOX15-203ENST00000570788 1093 ntBASIC19.22■□□□□ 0.67
RAB40ALP0C0E4 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC19.22■□□□□ 0.67
RAB40ALP0C0E4 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
RAB40ALP0C0E4 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
RAB40ALP0C0E4 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC19.22■□□□□ 0.67
RAB40ALP0C0E4 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC19.22■□□□□ 0.67
RAB40ALP0C0E4 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC19.22■□□□□ 0.67
RAB40ALP0C0E4 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
RAB40ALP0C0E4 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
RAB40ALP0C0E4 TUB-203ENST00000534099 1759 ntTSL 2 BASIC19.21■□□□□ 0.67
RAB40ALP0C0E4 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
RAB40ALP0C0E4 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
RAB40ALP0C0E4 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC19.21■□□□□ 0.67
RAB40ALP0C0E4 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC19.21■□□□□ 0.67
RAB40ALP0C0E4 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
RAB40ALP0C0E4 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
RAB40ALP0C0E4 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
RAB40ALP0C0E4 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC19.21■□□□□ 0.67
RAB40ALP0C0E4 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC19.21■□□□□ 0.67
RAB40ALP0C0E4 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC19.21■□□□□ 0.67
RAB40ALP0C0E4 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC19.21■□□□□ 0.67
RAB40ALP0C0E4 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC19.21■□□□□ 0.67
RAB40ALP0C0E4 BRWD1-AS2-201ENST00000603064 1028 ntBASIC19.21■□□□□ 0.67
RAB40ALP0C0E4 AL359736.2-201ENST00000621992 437 ntBASIC19.21■□□□□ 0.67
RAB40ALP0C0E4 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC19.21■□□□□ 0.67
RAB40ALP0C0E4 FBXW4P1-201ENST00000426721 2239 ntBASIC19.21■□□□□ 0.67
RAB40ALP0C0E4 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
RAB40ALP0C0E4 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
RAB40ALP0C0E4 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
RAB40ALP0C0E4 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
RAB40ALP0C0E4 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC19.2■□□□□ 0.66
RAB40ALP0C0E4 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC19.2■□□□□ 0.66
RAB40ALP0C0E4 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
RAB40ALP0C0E4 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
RAB40ALP0C0E4 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
RAB40ALP0C0E4 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC19.2■□□□□ 0.66
RAB40ALP0C0E4 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
RAB40ALP0C0E4 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC19.2■□□□□ 0.66
RAB40ALP0C0E4 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
RAB40ALP0C0E4 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
RAB40ALP0C0E4 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC19.2■□□□□ 0.66
RAB40ALP0C0E4 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
RAB40ALP0C0E4 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
RAB40ALP0C0E4 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
RAB40ALP0C0E4 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC19.19■□□□□ 0.66
RAB40ALP0C0E4 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
RAB40ALP0C0E4 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
RAB40ALP0C0E4 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC19.19■□□□□ 0.66
RAB40ALP0C0E4 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
RAB40ALP0C0E4 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
RAB40ALP0C0E4 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
RAB40ALP0C0E4 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC19.19■□□□□ 0.66
RAB40ALP0C0E4 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
RAB40ALP0C0E4 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC19.19■□□□□ 0.66
RAB40ALP0C0E4 RNF121-214ENST00000533380 870 ntTSL 3 BASIC19.19■□□□□ 0.66
RAB40ALP0C0E4 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
RAB40ALP0C0E4 RN7SL471P-201ENST00000580476 299 ntBASIC19.19■□□□□ 0.66
RAB40ALP0C0E4 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC19.19■□□□□ 0.66
RAB40ALP0C0E4 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC19.19■□□□□ 0.66
RAB40ALP0C0E4 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC19.19■□□□□ 0.66
RAB40ALP0C0E4 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC19.19■□□□□ 0.66
RAB40ALP0C0E4 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
RAB40ALP0C0E4 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
RAB40ALP0C0E4 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
RAB40ALP0C0E4 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
RAB40ALP0C0E4 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC19.18■□□□□ 0.66
RAB40ALP0C0E4 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
RAB40ALP0C0E4 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC19.18■□□□□ 0.66
RAB40ALP0C0E4 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
RAB40ALP0C0E4 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC19.18■□□□□ 0.66
RAB40ALP0C0E4 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
RAB40ALP0C0E4 RPS2P4-201ENST00000476944 856 ntBASIC19.18■□□□□ 0.66
RAB40ALP0C0E4 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
RAB40ALP0C0E4 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC19.18■□□□□ 0.66
RAB40ALP0C0E4 AL356652.1-201ENST00000615962 565 ntBASIC19.18■□□□□ 0.66
RAB40ALP0C0E4 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC19.18■□□□□ 0.66
RAB40ALP0C0E4 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC19.18■□□□□ 0.66
RAB40ALP0C0E4 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
RAB40ALP0C0E4 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
RAB40ALP0C0E4 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
RAB40ALP0C0E4 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
RAB40ALP0C0E4 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
RAB40ALP0C0E4 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC19.18■□□□□ 0.66
RAB40ALP0C0E4 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC19.18■□□□□ 0.66
RAB40ALP0C0E4 MED17-221ENST00000639724 2317 ntTSL 5 BASIC19.18■□□□□ 0.66
RAB40ALP0C0E4 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
RAB40ALP0C0E4 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
RAB40ALP0C0E4 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
RAB40ALP0C0E4 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
RAB40ALP0C0E4 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC19.17■□□□□ 0.66
RAB40ALP0C0E4 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC19.17■□□□□ 0.66
RAB40ALP0C0E4 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
RAB40ALP0C0E4 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
RAB40ALP0C0E4 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
RAB40ALP0C0E4 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
RAB40ALP0C0E4 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC19.17■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 45.6 ms