Protein–RNA interactions for Protein: P09455

RBP1, Retinol-binding protein 1, humanhuman

Predictions only

Length 135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RBP1P09455 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
RBP1P09455 RBM17P2-201ENST00000616397 1405 ntBASIC20.05■□□□□ 0.8
RBP1P09455 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
RBP1P09455 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
RBP1P09455 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
RBP1P09455 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
RBP1P09455 AC007322.3-201ENST00000426526 701 ntBASIC20.05■□□□□ 0.8
RBP1P09455 KRT18P14-201ENST00000534205 1250 ntBASIC20.05■□□□□ 0.8
RBP1P09455 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC20.05■□□□□ 0.8
RBP1P09455 SP2-202ENST00000613139 908 ntTSL 5 BASIC20.05■□□□□ 0.8
RBP1P09455 RAB43-208ENST00000615093 783 ntTSL 5 BASIC20.05■□□□□ 0.8
RBP1P09455 FGF8-207ENST00000618991 856 ntTSL 3 BASIC20.05■□□□□ 0.8
RBP1P09455 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
RBP1P09455 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
RBP1P09455 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
RBP1P09455 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC20.05■□□□□ 0.8
RBP1P09455 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
RBP1P09455 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC20.05■□□□□ 0.8
RBP1P09455 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC20.05■□□□□ 0.8
RBP1P09455 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC20.04■□□□□ 0.8
RBP1P09455 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC20.04■□□□□ 0.8
RBP1P09455 AFG3L1P-217ENST00000557444 2447 ntBASIC20.04■□□□□ 0.8
RBP1P09455 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
RBP1P09455 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
RBP1P09455 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
RBP1P09455 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
RBP1P09455 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
RBP1P09455 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC20.04■□□□□ 0.8
RBP1P09455 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
RBP1P09455 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC20.04■□□□□ 0.8
RBP1P09455 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC20.04■□□□□ 0.8
RBP1P09455 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
RBP1P09455 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
RBP1P09455 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
RBP1P09455 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC20.04■□□□□ 0.8
RBP1P09455 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC20.04■□□□□ 0.8
RBP1P09455 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
RBP1P09455 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC20.03■□□□□ 0.8
RBP1P09455 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
RBP1P09455 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
RBP1P09455 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
RBP1P09455 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
RBP1P09455 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
RBP1P09455 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC20.03■□□□□ 0.8
RBP1P09455 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
RBP1P09455 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
RBP1P09455 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC20.03■□□□□ 0.8
RBP1P09455 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC20.03■□□□□ 0.8
RBP1P09455 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
RBP1P09455 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
RBP1P09455 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC20.03■□□□□ 0.8
RBP1P09455 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC20.03■□□□□ 0.8
RBP1P09455 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
RBP1P09455 AC004854.2-201ENST00000608450 1441 ntBASIC20.02■□□□□ 0.8
RBP1P09455 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
RBP1P09455 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC20.02■□□□□ 0.8
RBP1P09455 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC20.02■□□□□ 0.8
RBP1P09455 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC20.02■□□□□ 0.8
RBP1P09455 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
RBP1P09455 CD44-222ENST00000526025 1052 ntTSL 2 BASIC20.02■□□□□ 0.8
RBP1P09455 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
RBP1P09455 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC20.02■□□□□ 0.8
RBP1P09455 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC20.02■□□□□ 0.8
RBP1P09455 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
RBP1P09455 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC20.02■□□□□ 0.8
RBP1P09455 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
RBP1P09455 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
RBP1P09455 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.79
RBP1P09455 BID-204ENST00000399767 2129 ntTSL 2 BASIC20.02■□□□□ 0.79
RBP1P09455 TCF3P1-201ENST00000423021 1937 ntBASIC20.02■□□□□ 0.79
RBP1P09455 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC20.02■□□□□ 0.79
RBP1P09455 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
RBP1P09455 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
RBP1P09455 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC20.01■□□□□ 0.79
RBP1P09455 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC20.01■□□□□ 0.79
RBP1P09455 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
RBP1P09455 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
RBP1P09455 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
RBP1P09455 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
RBP1P09455 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
RBP1P09455 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
RBP1P09455 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
RBP1P09455 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
RBP1P09455 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
RBP1P09455 SAPCD2P1-201ENST00000395413 1184 ntBASIC20.01■□□□□ 0.79
RBP1P09455 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
RBP1P09455 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
RBP1P09455 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC20.01■□□□□ 0.79
RBP1P09455 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
RBP1P09455 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC20.01■□□□□ 0.79
RBP1P09455 FAM21FP-204ENST00000608637 956 ntBASIC20.01■□□□□ 0.79
RBP1P09455 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC20.01■□□□□ 0.79
RBP1P09455 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
RBP1P09455 KRT8P36-201ENST00000489121 1440 ntBASIC20.01■□□□□ 0.79
RBP1P09455 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
RBP1P09455 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
RBP1P09455 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC20.01■□□□□ 0.79
RBP1P09455 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
RBP1P09455 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
RBP1P09455 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC20■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 24.3 ms