Protein–RNA interactions for Protein: P09001

MRPL3, 39S ribosomal protein L3, mitochondrial, humanhuman

Known RBP Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL3P09001 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
MRPL3P09001 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
MRPL3P09001 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC18.25■□□□□ 0.51
MRPL3P09001 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
MRPL3P09001 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC18.24■□□□□ 0.51
MRPL3P09001 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
MRPL3P09001 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
MRPL3P09001 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC18.24■□□□□ 0.51
MRPL3P09001 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC18.24■□□□□ 0.51
MRPL3P09001 RNF165-205ENST00000588679 2904 ntBASIC18.24■□□□□ 0.51
MRPL3P09001 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
MRPL3P09001 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
MRPL3P09001 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC18.24■□□□□ 0.51
MRPL3P09001 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
MRPL3P09001 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
MRPL3P09001 AC079140.4-201ENST00000507448 529 ntBASIC18.24■□□□□ 0.51
MRPL3P09001 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC18.24■□□□□ 0.51
MRPL3P09001 RARRES2P11-201ENST00000635158 484 ntBASIC18.24■□□□□ 0.51
MRPL3P09001 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
MRPL3P09001 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC18.24■□□□□ 0.51
MRPL3P09001 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
MRPL3P09001 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
MRPL3P09001 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
MRPL3P09001 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
MRPL3P09001 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC18.23■□□□□ 0.51
MRPL3P09001 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
MRPL3P09001 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC18.23■□□□□ 0.51
MRPL3P09001 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
MRPL3P09001 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
MRPL3P09001 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
MRPL3P09001 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
MRPL3P09001 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
MRPL3P09001 STX6-204ENST00000542060 4809 ntTSL 2 BASIC18.23■□□□□ 0.51
MRPL3P09001 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC18.23■□□□□ 0.51
MRPL3P09001 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
MRPL3P09001 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
MRPL3P09001 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
MRPL3P09001 POU5F1P4-201ENST00000413175 1085 ntBASIC18.23■□□□□ 0.51
MRPL3P09001 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
MRPL3P09001 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC18.23■□□□□ 0.51
MRPL3P09001 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC18.23■□□□□ 0.51
MRPL3P09001 AL136967.2-201ENST00000623968 743 ntBASIC18.23■□□□□ 0.51
MRPL3P09001 CPT2-209ENST00000636935 803 ntTSL 5 BASIC18.23■□□□□ 0.51
MRPL3P09001 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
MRPL3P09001 TCF3P1-201ENST00000423021 1937 ntBASIC18.23■□□□□ 0.51
MRPL3P09001 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
MRPL3P09001 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC18.23■□□□□ 0.51
MRPL3P09001 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC18.23■□□□□ 0.51
MRPL3P09001 SMG8-203ENST00000578922 2178 ntBASIC18.23■□□□□ 0.51
MRPL3P09001 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC18.22■□□□□ 0.51
MRPL3P09001 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
MRPL3P09001 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
MRPL3P09001 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
MRPL3P09001 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
MRPL3P09001 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
MRPL3P09001 KRT87P-202ENST00000534226 1464 ntBASIC18.22■□□□□ 0.51
MRPL3P09001 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
MRPL3P09001 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
MRPL3P09001 MTURN-203ENST00000409688 843 ntTSL 2 BASIC18.22■□□□□ 0.51
MRPL3P09001 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
MRPL3P09001 AL031432.3-201ENST00000607698 485 ntBASIC18.22■□□□□ 0.51
MRPL3P09001 AL354811.1-201ENST00000610286 706 ntBASIC18.22■□□□□ 0.51
MRPL3P09001 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
MRPL3P09001 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
MRPL3P09001 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
MRPL3P09001 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
MRPL3P09001 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
MRPL3P09001 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
MRPL3P09001 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
MRPL3P09001 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
MRPL3P09001 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
MRPL3P09001 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC18.22■□□□□ 0.51
MRPL3P09001 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
MRPL3P09001 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC18.21■□□□□ 0.51
MRPL3P09001 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC18.21■□□□□ 0.51
MRPL3P09001 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
MRPL3P09001 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
MRPL3P09001 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
MRPL3P09001 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC18.21■□□□□ 0.51
MRPL3P09001 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
MRPL3P09001 AC245052.3-201ENST00000450182 901 ntBASIC18.21■□□□□ 0.51
MRPL3P09001 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC18.21■□□□□ 0.51
MRPL3P09001 SERP1-208ENST00000491660 830 ntTSL 2 BASIC18.21■□□□□ 0.51
MRPL3P09001 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC18.21■□□□□ 0.51
MRPL3P09001 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC18.21■□□□□ 0.51
MRPL3P09001 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
MRPL3P09001 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
MRPL3P09001 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
MRPL3P09001 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
MRPL3P09001 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC18.21■□□□□ 0.51
MRPL3P09001 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
MRPL3P09001 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
MRPL3P09001 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
MRPL3P09001 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC18.2■□□□□ 0.5
MRPL3P09001 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
MRPL3P09001 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
MRPL3P09001 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
MRPL3P09001 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
MRPL3P09001 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
MRPL3P09001 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC18.2■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 21.2 ms