Protein–RNA interactions for Protein: P07858

CTSB, Cathepsin B, humanhuman

Predictions only

Length 339 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSBP07858 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC19.36■□□□□ 0.69
CTSBP07858 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
CTSBP07858 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CTSBP07858 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CTSBP07858 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC19.36■□□□□ 0.69
CTSBP07858 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
CTSBP07858 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
CTSBP07858 AC092368.3-202ENST00000574180 1591 ntBASIC19.36■□□□□ 0.69
CTSBP07858 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC19.35■□□□□ 0.69
CTSBP07858 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC19.35■□□□□ 0.69
CTSBP07858 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC19.35■□□□□ 0.69
CTSBP07858 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC19.35■□□□□ 0.69
CTSBP07858 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC19.35■□□□□ 0.69
CTSBP07858 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC19.35■□□□□ 0.69
CTSBP07858 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
CTSBP07858 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CTSBP07858 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CTSBP07858 SERP1-205ENST00000487153 657 ntTSL 4 BASIC19.35■□□□□ 0.69
CTSBP07858 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC19.35■□□□□ 0.69
CTSBP07858 ADM-205ENST00000528544 586 ntTSL 2 BASIC19.35■□□□□ 0.69
CTSBP07858 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC19.35■□□□□ 0.69
CTSBP07858 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC19.35■□□□□ 0.69
CTSBP07858 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC19.35■□□□□ 0.69
CTSBP07858 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC19.35■□□□□ 0.69
CTSBP07858 AC008687.6-201ENST00000596318 630 ntBASIC19.35■□□□□ 0.69
CTSBP07858 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
CTSBP07858 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CTSBP07858 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CTSBP07858 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CTSBP07858 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CTSBP07858 FP700111.2-201ENST00000619190 1892 ntBASIC19.35■□□□□ 0.69
CTSBP07858 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CTSBP07858 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CTSBP07858 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC19.34■□□□□ 0.69
CTSBP07858 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CTSBP07858 CRK-204ENST00000574295 1391 ntTSL 5 BASIC19.34■□□□□ 0.69
CTSBP07858 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CTSBP07858 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CTSBP07858 AC006128.1-201ENST00000624704 1661 ntBASIC19.34■□□□□ 0.69
CTSBP07858 PALM-208ENST00000592155 2272 ntTSL 4 BASIC19.34■□□□□ 0.69
CTSBP07858 PRORSD1P-201ENST00000295112 541 ntBASIC19.34■□□□□ 0.69
CTSBP07858 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CTSBP07858 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CTSBP07858 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC19.34■□□□□ 0.69
CTSBP07858 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC19.34■□□□□ 0.69
CTSBP07858 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC19.34■□□□□ 0.69
CTSBP07858 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC19.34■□□□□ 0.69
CTSBP07858 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC19.34■□□□□ 0.69
CTSBP07858 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
CTSBP07858 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
CTSBP07858 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC19.34■□□□□ 0.69
CTSBP07858 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CTSBP07858 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
CTSBP07858 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.69
CTSBP07858 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.69
CTSBP07858 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
CTSBP07858 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC19.33■□□□□ 0.69
CTSBP07858 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC19.33■□□□□ 0.69
CTSBP07858 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
CTSBP07858 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
CTSBP07858 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC19.33■□□□□ 0.68
CTSBP07858 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CTSBP07858 PGM5P4-201ENST00000421970 445 ntBASIC19.33■□□□□ 0.68
CTSBP07858 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC19.33■□□□□ 0.68
CTSBP07858 HES2-205ENST00000487437 968 ntTSL 3 BASIC19.33■□□□□ 0.68
CTSBP07858 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
CTSBP07858 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CTSBP07858 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CTSBP07858 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CTSBP07858 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC19.33■□□□□ 0.68
CTSBP07858 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.68
CTSBP07858 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CTSBP07858 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CTSBP07858 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
CTSBP07858 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CTSBP07858 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC19.32■□□□□ 0.68
CTSBP07858 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
CTSBP07858 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CTSBP07858 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CTSBP07858 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC19.32■□□□□ 0.68
CTSBP07858 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
CTSBP07858 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
CTSBP07858 AC026366.1-201ENST00000488803 879 ntBASIC19.32■□□□□ 0.68
CTSBP07858 AP003097.1-201ENST00000530657 1135 ntBASIC19.32■□□□□ 0.68
CTSBP07858 KLF2-202ENST00000592003 564 ntTSL 3 BASIC19.32■□□□□ 0.68
CTSBP07858 AC006058.3-201ENST00000606217 1069 ntBASIC19.32■□□□□ 0.68
CTSBP07858 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CTSBP07858 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC19.32■□□□□ 0.68
CTSBP07858 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CTSBP07858 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CTSBP07858 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CTSBP07858 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC19.31■□□□□ 0.68
CTSBP07858 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CTSBP07858 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CTSBP07858 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC19.31■□□□□ 0.68
CTSBP07858 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC19.31■□□□□ 0.68
CTSBP07858 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC19.31■□□□□ 0.68
CTSBP07858 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC19.31■□□□□ 0.68
CTSBP07858 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
CTSBP07858 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC19.31■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 66 ms