Protein–RNA interactions for Protein: P04437

TCRA, T-cell receptor alpha chain V region CTL-L17, humanhuman

Predictions only

Length 139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRAP04437 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
TCRAP04437 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
TCRAP04437 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
TCRAP04437 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
TCRAP04437 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC15.47■□□□□ 0.07
TCRAP04437 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC15.47■□□□□ 0.07
TCRAP04437 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
TCRAP04437 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
TCRAP04437 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC15.47■□□□□ 0.07
TCRAP04437 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC15.47■□□□□ 0.07
TCRAP04437 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
TCRAP04437 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC15.47■□□□□ 0.07
TCRAP04437 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
TCRAP04437 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
TCRAP04437 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC15.47■□□□□ 0.07
TCRAP04437 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
TCRAP04437 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
TCRAP04437 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC15.47■□□□□ 0.07
TCRAP04437 LHPP-203ENST00000392757 840 ntTSL 3 BASIC15.47■□□□□ 0.07
TCRAP04437 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
TCRAP04437 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
TCRAP04437 MIR4767-201ENST00000582827 78 ntBASIC15.47■□□□□ 0.07
TCRAP04437 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
TCRAP04437 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC15.47■□□□□ 0.07
TCRAP04437 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC15.47■□□□□ 0.07
TCRAP04437 AL158211.5-201ENST00000623583 2518 ntBASIC15.47■□□□□ 0.07
TCRAP04437 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
TCRAP04437 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC15.47■□□□□ 0.07
TCRAP04437 LBX2-AS1-202ENST00000603175 2083 ntBASIC15.47■□□□□ 0.07
TCRAP04437 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
TCRAP04437 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC15.46■□□□□ 0.07
TCRAP04437 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC15.46■□□□□ 0.07
TCRAP04437 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
TCRAP04437 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC15.46■□□□□ 0.07
TCRAP04437 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.07
TCRAP04437 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
TCRAP04437 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
TCRAP04437 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
TCRAP04437 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC15.46■□□□□ 0.07
TCRAP04437 MFF-208ENST00000409616 1247 ntTSL 5 BASIC15.46■□□□□ 0.07
TCRAP04437 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC15.46■□□□□ 0.07
TCRAP04437 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
TCRAP04437 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC15.46■□□□□ 0.07
TCRAP04437 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
TCRAP04437 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC15.46■□□□□ 0.07
TCRAP04437 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
TCRAP04437 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
TCRAP04437 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
TCRAP04437 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC15.46■□□□□ 0.07
TCRAP04437 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC15.46■□□□□ 0.07
TCRAP04437 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.07
TCRAP04437 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
TCRAP04437 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC15.46■□□□□ 0.06
TCRAP04437 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC15.46■□□□□ 0.06
TCRAP04437 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC15.46■□□□□ 0.06
TCRAP04437 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC15.46■□□□□ 0.06
TCRAP04437 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
TCRAP04437 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC15.45■□□□□ 0.06
TCRAP04437 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC15.45■□□□□ 0.06
TCRAP04437 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC15.45■□□□□ 0.06
TCRAP04437 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
TCRAP04437 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC15.45■□□□□ 0.06
TCRAP04437 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
TCRAP04437 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC15.45■□□□□ 0.06
TCRAP04437 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC15.45■□□□□ 0.06
TCRAP04437 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
TCRAP04437 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
TCRAP04437 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
TCRAP04437 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC15.45■□□□□ 0.06
TCRAP04437 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
TCRAP04437 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
TCRAP04437 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC15.45■□□□□ 0.06
TCRAP04437 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC15.45■□□□□ 0.06
TCRAP04437 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
TCRAP04437 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC15.45■□□□□ 0.06
TCRAP04437 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
TCRAP04437 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC15.45■□□□□ 0.06
TCRAP04437 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
TCRAP04437 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC15.45■□□□□ 0.06
TCRAP04437 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
TCRAP04437 AC098818.2-201ENST00000564925 2320 ntBASIC15.45■□□□□ 0.06
TCRAP04437 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
TCRAP04437 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC15.45■□□□□ 0.06
TCRAP04437 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
TCRAP04437 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
TCRAP04437 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
TCRAP04437 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC15.44■□□□□ 0.06
TCRAP04437 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
TCRAP04437 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC15.44■□□□□ 0.06
TCRAP04437 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
TCRAP04437 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
TCRAP04437 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
TCRAP04437 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
TCRAP04437 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
TCRAP04437 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
TCRAP04437 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC15.44■□□□□ 0.06
TCRAP04437 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
TCRAP04437 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
TCRAP04437 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
TCRAP04437 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC15.44■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 21.1 ms