Protein–RNA interactions for Protein: P03999

OPN1SW, Short-wave-sensitive opsin 1, humanhuman

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
OPN1SWP03999 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
OPN1SWP03999 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
OPN1SWP03999 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
OPN1SWP03999 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
OPN1SWP03999 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
OPN1SWP03999 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
OPN1SWP03999 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC18.99■□□□□ 0.63
OPN1SWP03999 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
OPN1SWP03999 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
OPN1SWP03999 AC027612.3-201ENST00000413684 1047 ntBASIC18.99■□□□□ 0.63
OPN1SWP03999 PTPA-214ENST00000423100 988 ntTSL 2 BASIC18.99■□□□□ 0.63
OPN1SWP03999 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC18.99■□□□□ 0.63
OPN1SWP03999 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC18.99■□□□□ 0.63
OPN1SWP03999 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC18.99■□□□□ 0.63
OPN1SWP03999 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
OPN1SWP03999 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
OPN1SWP03999 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
OPN1SWP03999 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
OPN1SWP03999 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
OPN1SWP03999 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
OPN1SWP03999 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
OPN1SWP03999 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
OPN1SWP03999 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC18.99■□□□□ 0.63
OPN1SWP03999 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC18.99■□□□□ 0.63
OPN1SWP03999 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
OPN1SWP03999 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
OPN1SWP03999 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
OPN1SWP03999 TCF3P1-201ENST00000423021 1937 ntBASIC18.98■□□□□ 0.63
OPN1SWP03999 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
OPN1SWP03999 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
OPN1SWP03999 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
OPN1SWP03999 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
OPN1SWP03999 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC18.98■□□□□ 0.63
OPN1SWP03999 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
OPN1SWP03999 AC116050.2-201ENST00000612102 1779 ntBASIC18.98■□□□□ 0.63
OPN1SWP03999 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
OPN1SWP03999 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC18.98■□□□□ 0.63
OPN1SWP03999 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
OPN1SWP03999 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
OPN1SWP03999 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
OPN1SWP03999 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
OPN1SWP03999 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC18.98■□□□□ 0.63
OPN1SWP03999 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
OPN1SWP03999 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC18.97■□□□□ 0.63
OPN1SWP03999 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
OPN1SWP03999 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
OPN1SWP03999 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
OPN1SWP03999 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
OPN1SWP03999 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC18.97■□□□□ 0.63
OPN1SWP03999 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
OPN1SWP03999 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC18.97■□□□□ 0.63
OPN1SWP03999 DUX4L2-201ENST00000561772 1275 ntBASIC18.97■□□□□ 0.63
OPN1SWP03999 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC18.97■□□□□ 0.63
OPN1SWP03999 AC005837.3-201ENST00000612163 286 ntBASIC18.97■□□□□ 0.63
OPN1SWP03999 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC18.97■□□□□ 0.63
OPN1SWP03999 DUX4L6-201ENST00000626483 1275 ntBASIC18.97■□□□□ 0.63
OPN1SWP03999 DUX4L1-201ENST00000627662 1275 ntBASIC18.97■□□□□ 0.63
OPN1SWP03999 DUX4L8-201ENST00000629013 1275 ntBASIC18.97■□□□□ 0.63
OPN1SWP03999 DUX4L3-201ENST00000630187 1275 ntBASIC18.97■□□□□ 0.63
OPN1SWP03999 DUX4L7-201ENST00000630678 1275 ntBASIC18.97■□□□□ 0.63
OPN1SWP03999 DUX4L5-201ENST00000630834 1275 ntBASIC18.97■□□□□ 0.63
OPN1SWP03999 MIR2861-201ENST00000636310 90 ntBASIC18.97■□□□□ 0.63
OPN1SWP03999 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
OPN1SWP03999 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
OPN1SWP03999 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC18.97■□□□□ 0.63
OPN1SWP03999 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
OPN1SWP03999 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC18.97■□□□□ 0.63
OPN1SWP03999 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
OPN1SWP03999 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
OPN1SWP03999 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC18.96■□□□□ 0.63
OPN1SWP03999 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
OPN1SWP03999 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
OPN1SWP03999 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
OPN1SWP03999 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC18.96■□□□□ 0.63
OPN1SWP03999 LINC02228-203ENST00000641970 1355 ntBASIC18.96■□□□□ 0.63
OPN1SWP03999 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
OPN1SWP03999 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
OPN1SWP03999 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC18.96■□□□□ 0.63
OPN1SWP03999 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
OPN1SWP03999 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
OPN1SWP03999 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
OPN1SWP03999 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
OPN1SWP03999 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
OPN1SWP03999 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC18.96■□□□□ 0.63
OPN1SWP03999 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
OPN1SWP03999 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
OPN1SWP03999 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
OPN1SWP03999 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
OPN1SWP03999 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC18.95■□□□□ 0.62
OPN1SWP03999 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
OPN1SWP03999 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
OPN1SWP03999 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
OPN1SWP03999 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
OPN1SWP03999 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
OPN1SWP03999 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC18.95■□□□□ 0.62
OPN1SWP03999 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC18.95■□□□□ 0.62
OPN1SWP03999 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC18.95■□□□□ 0.62
OPN1SWP03999 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
OPN1SWP03999 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC18.95■□□□□ 0.62
OPN1SWP03999 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC18.95■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 54.8 ms