Protein–RNA interactions for Protein: O95970

LGI1, Leucine-rich glioma-inactivated protein 1, humanhuman

Predictions only

Length 557 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LGI1O95970 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
LGI1O95970 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
LGI1O95970 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC18.8■□□□□ 0.6
LGI1O95970 HACD1-201ENST00000326961 773 ntTSL 2 BASIC18.8■□□□□ 0.6
LGI1O95970 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC18.8■□□□□ 0.6
LGI1O95970 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC18.8■□□□□ 0.6
LGI1O95970 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
LGI1O95970 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
LGI1O95970 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
LGI1O95970 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
LGI1O95970 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC18.8■□□□□ 0.6
LGI1O95970 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
LGI1O95970 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC18.8■□□□□ 0.6
LGI1O95970 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
LGI1O95970 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
LGI1O95970 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
LGI1O95970 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
LGI1O95970 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC18.79■□□□□ 0.6
LGI1O95970 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
LGI1O95970 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
LGI1O95970 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
LGI1O95970 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC18.79■□□□□ 0.6
LGI1O95970 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
LGI1O95970 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC18.79■□□□□ 0.6
LGI1O95970 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
LGI1O95970 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC18.79■□□□□ 0.6
LGI1O95970 MIR5787-201ENST00000611784 55 ntBASIC18.79■□□□□ 0.6
LGI1O95970 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC18.79■□□□□ 0.6
LGI1O95970 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
LGI1O95970 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
LGI1O95970 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
LGI1O95970 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
LGI1O95970 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
LGI1O95970 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
LGI1O95970 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
LGI1O95970 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC18.78■□□□□ 0.6
LGI1O95970 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
LGI1O95970 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
LGI1O95970 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
LGI1O95970 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
LGI1O95970 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
LGI1O95970 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
LGI1O95970 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
LGI1O95970 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
LGI1O95970 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC18.78■□□□□ 0.6
LGI1O95970 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
LGI1O95970 AC007322.3-201ENST00000426526 701 ntBASIC18.78■□□□□ 0.6
LGI1O95970 AC034268.1-201ENST00000441047 882 ntBASIC18.78■□□□□ 0.6
LGI1O95970 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
LGI1O95970 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC18.78■□□□□ 0.6
LGI1O95970 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
LGI1O95970 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC18.78■□□□□ 0.6
LGI1O95970 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
LGI1O95970 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
LGI1O95970 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
LGI1O95970 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC18.78■□□□□ 0.6
LGI1O95970 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC18.78■□□□□ 0.6
LGI1O95970 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
LGI1O95970 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
LGI1O95970 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC18.77■□□□□ 0.6
LGI1O95970 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
LGI1O95970 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
LGI1O95970 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
LGI1O95970 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
LGI1O95970 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC18.77■□□□□ 0.6
LGI1O95970 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
LGI1O95970 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
LGI1O95970 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
LGI1O95970 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC18.77■□□□□ 0.6
LGI1O95970 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC18.77■□□□□ 0.6
LGI1O95970 CD44-222ENST00000526025 1052 ntTSL 2 BASIC18.77■□□□□ 0.6
LGI1O95970 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
LGI1O95970 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC18.77■□□□□ 0.6
LGI1O95970 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
LGI1O95970 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
LGI1O95970 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
LGI1O95970 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC18.77■□□□□ 0.6
LGI1O95970 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC18.77■□□□□ 0.59
LGI1O95970 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
LGI1O95970 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.59
LGI1O95970 TCF3P1-201ENST00000423021 1937 ntBASIC18.76■□□□□ 0.59
LGI1O95970 KRT8P36-201ENST00000489121 1440 ntBASIC18.76■□□□□ 0.59
LGI1O95970 BID-204ENST00000399767 2129 ntTSL 2 BASIC18.76■□□□□ 0.59
LGI1O95970 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC18.76■□□□□ 0.59
LGI1O95970 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
LGI1O95970 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC18.76■□□□□ 0.59
LGI1O95970 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
LGI1O95970 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC18.76■□□□□ 0.59
LGI1O95970 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC18.76■□□□□ 0.59
LGI1O95970 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
LGI1O95970 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC18.76■□□□□ 0.59
LGI1O95970 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC18.76■□□□□ 0.59
LGI1O95970 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC18.76■□□□□ 0.59
LGI1O95970 ANKRD20A6P-201ENST00000618763 204 ntBASIC18.76■□□□□ 0.59
LGI1O95970 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC18.76■□□□□ 0.59
LGI1O95970 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC18.76■□□□□ 0.59
LGI1O95970 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
LGI1O95970 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC18.76■□□□□ 0.59
LGI1O95970 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC18.76■□□□□ 0.59
LGI1O95970 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC18.76■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 67.2 ms