Protein–RNA interactions for Protein: O94913

PCF11, Pre-mRNA cleavage complex 2 protein Pcf11, humanhuman

Known RBP Predictions only

Length 1,555 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11O94913 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC32■■■□□ 2.71
PCF11O94913 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC31.99■■■□□ 2.71
PCF11O94913 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC31.99■■■□□ 2.71
PCF11O94913 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC31.99■■■□□ 2.71
PCF11O94913 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC31.99■■■□□ 2.71
PCF11O94913 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC31.99■■■□□ 2.71
PCF11O94913 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC31.99■■■□□ 2.71
PCF11O94913 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC31.99■■■□□ 2.71
PCF11O94913 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC31.99■■■□□ 2.71
PCF11O94913 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC31.99■■■□□ 2.71
PCF11O94913 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC31.99■■■□□ 2.71
PCF11O94913 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC31.99■■■□□ 2.71
PCF11O94913 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC31.99■■■□□ 2.71
PCF11O94913 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC31.98■■■□□ 2.71
PCF11O94913 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC31.98■■■□□ 2.71
PCF11O94913 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC31.98■■■□□ 2.71
PCF11O94913 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC31.98■■■□□ 2.71
PCF11O94913 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC31.98■■■□□ 2.71
PCF11O94913 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC31.98■■■□□ 2.71
PCF11O94913 SPIB-206ENST00000596074 847 ntTSL 2 BASIC31.98■■■□□ 2.71
PCF11O94913 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC31.98■■■□□ 2.71
PCF11O94913 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC31.98■■■□□ 2.71
PCF11O94913 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC31.98■■■□□ 2.71
PCF11O94913 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC31.98■■■□□ 2.71
PCF11O94913 AC027702.1-201ENST00000563810 1770 ntBASIC31.98■■■□□ 2.71
PCF11O94913 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC31.98■■■□□ 2.71
PCF11O94913 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC31.98■■■□□ 2.71
PCF11O94913 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC31.98■■■□□ 2.71
PCF11O94913 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC31.98■■■□□ 2.71
PCF11O94913 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC31.98■■■□□ 2.71
PCF11O94913 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC31.98■■■□□ 2.71
PCF11O94913 ABHD17AP6-201ENST00000458502 1044 ntBASIC31.98■■■□□ 2.71
PCF11O94913 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC31.98■■■□□ 2.71
PCF11O94913 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC31.98■■■□□ 2.71
PCF11O94913 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC31.98■■■□□ 2.71
PCF11O94913 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC31.98■■■□□ 2.71
PCF11O94913 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC31.97■■■□□ 2.71
PCF11O94913 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC31.97■■■□□ 2.71
PCF11O94913 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC31.97■■■□□ 2.71
PCF11O94913 KRT8P36-201ENST00000489121 1440 ntBASIC31.97■■■□□ 2.71
PCF11O94913 TNK2-201ENST00000333602 5270 ntAPPRIS P1 TSL 1 (best) BASIC31.97■■■□□ 2.71
PCF11O94913 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC31.97■■■□□ 2.71
PCF11O94913 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC31.97■■■□□ 2.71
PCF11O94913 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC31.97■■■□□ 2.71
PCF11O94913 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC31.97■■■□□ 2.71
PCF11O94913 SNORA78-201ENST00000459373 127 ntBASIC31.97■■■□□ 2.71
PCF11O94913 WDR88-203ENST00000592765 651 ntTSL 5 BASIC31.97■■■□□ 2.71
PCF11O94913 AL445228.2-201ENST00000605589 952 ntBASIC31.97■■■□□ 2.71
PCF11O94913 REXO1L12P-201ENST00000622156 912 ntBASIC31.97■■■□□ 2.71
PCF11O94913 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC31.97■■■□□ 2.71
PCF11O94913 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC31.96■■■□□ 2.71
PCF11O94913 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC31.96■■■□□ 2.71
PCF11O94913 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC31.96■■■□□ 2.71
PCF11O94913 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC31.96■■■□□ 2.71
PCF11O94913 STAC-204ENST00000457375 1366 ntTSL 2 BASIC31.96■■■□□ 2.71
PCF11O94913 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC31.96■■■□□ 2.71
PCF11O94913 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC31.96■■■□□ 2.71
PCF11O94913 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC31.96■■■□□ 2.71
PCF11O94913 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC31.96■■■□□ 2.71
PCF11O94913 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC31.96■■■□□ 2.71
PCF11O94913 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC31.96■■■□□ 2.71
PCF11O94913 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC31.96■■■□□ 2.71
PCF11O94913 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC31.96■■■□□ 2.71
PCF11O94913 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC31.96■■■□□ 2.71
PCF11O94913 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC31.96■■■□□ 2.71
PCF11O94913 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC31.96■■■□□ 2.71
PCF11O94913 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC31.96■■■□□ 2.71
PCF11O94913 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC31.96■■■□□ 2.71
PCF11O94913 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC31.96■■■□□ 2.71
PCF11O94913 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC31.95■■■□□ 2.71
PCF11O94913 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC31.95■■■□□ 2.71
PCF11O94913 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC31.95■■■□□ 2.71
PCF11O94913 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC31.95■■■□□ 2.71
PCF11O94913 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC31.95■■■□□ 2.71
PCF11O94913 Z99916.2-201ENST00000604037 246 ntBASIC31.95■■■□□ 2.71
PCF11O94913 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC31.95■■■□□ 2.71
PCF11O94913 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC31.95■■■□□ 2.71
PCF11O94913 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC31.95■■■□□ 2.71
PCF11O94913 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC31.95■■■□□ 2.71
PCF11O94913 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC31.95■■■□□ 2.7
PCF11O94913 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC31.95■■■□□ 2.7
PCF11O94913 STK25-205ENST00000405883 1904 ntTSL 2 BASIC31.95■■■□□ 2.7
PCF11O94913 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC31.94■■■□□ 2.7
PCF11O94913 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC31.94■■■□□ 2.7
PCF11O94913 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC31.94■■■□□ 2.7
PCF11O94913 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC31.94■■■□□ 2.7
PCF11O94913 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC31.94■■■□□ 2.7
PCF11O94913 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC31.94■■■□□ 2.7
PCF11O94913 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC31.94■■■□□ 2.7
PCF11O94913 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC31.94■■■□□ 2.7
PCF11O94913 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC31.94■■■□□ 2.7
PCF11O94913 PTBP1P-201ENST00000554374 1601 ntBASIC31.94■■■□□ 2.7
PCF11O94913 KRASP1-201ENST00000407852 552 ntBASIC31.94■■■□□ 2.7
PCF11O94913 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC31.94■■■□□ 2.7
PCF11O94913 AL049796.1-201ENST00000565336 1766 ntBASIC31.94■■■□□ 2.7
PCF11O94913 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC31.93■■■□□ 2.7
PCF11O94913 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC31.93■■■□□ 2.7
PCF11O94913 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC31.93■■■□□ 2.7
PCF11O94913 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC31.93■■■□□ 2.7
PCF11O94913 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC31.93■■■□□ 2.7
Retrieved 100 of 98,524 protein–RNA pairs in 22.3 ms