Protein–RNA interactions for Protein: O75140

DEPDC5, GATOR complex protein DEPDC5, humanhuman

Predictions only

Length 1,603 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC5O75140 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC30.06■■■□□ 2.4
DEPDC5O75140 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC30.06■■■□□ 2.4
DEPDC5O75140 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC30.06■■■□□ 2.4
DEPDC5O75140 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC30.06■■■□□ 2.4
DEPDC5O75140 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC30.05■■■□□ 2.4
DEPDC5O75140 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC30.05■■■□□ 2.4
DEPDC5O75140 CABP2-204ENST00000636477 941 ntTSL 5 BASIC30.05■■■□□ 2.4
DEPDC5O75140 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC30.05■■■□□ 2.4
DEPDC5O75140 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC30.05■■■□□ 2.4
DEPDC5O75140 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC30.05■■■□□ 2.4
DEPDC5O75140 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC30.05■■■□□ 2.4
DEPDC5O75140 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC30.04■■■□□ 2.4
DEPDC5O75140 TREX2-204ENST00000370212 861 ntTSL 5 BASIC30.04■■■□□ 2.4
DEPDC5O75140 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC30.04■■■□□ 2.4
DEPDC5O75140 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC30.04■■■□□ 2.4
DEPDC5O75140 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC30.04■■■□□ 2.4
DEPDC5O75140 CD177P1-201ENST00000606252 935 ntBASIC30.04■■■□□ 2.4
DEPDC5O75140 MIR2861-201ENST00000636310 90 ntBASIC30.04■■■□□ 2.4
DEPDC5O75140 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC30.04■■■□□ 2.4
DEPDC5O75140 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC30.04■■■□□ 2.4
DEPDC5O75140 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC30.04■■■□□ 2.4
DEPDC5O75140 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC30.04■■■□□ 2.4
DEPDC5O75140 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC30.04■■■□□ 2.4
DEPDC5O75140 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC30.04■■■□□ 2.4
DEPDC5O75140 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC30.04■■■□□ 2.4
DEPDC5O75140 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC30.04■■■□□ 2.4
DEPDC5O75140 TSPY15P-201ENST00000457163 923 ntBASIC30.04■■■□□ 2.4
DEPDC5O75140 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC30.04■■■□□ 2.4
DEPDC5O75140 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC30.04■■■□□ 2.4
DEPDC5O75140 AL121829.2-201ENST00000620908 328 ntBASIC30.04■■■□□ 2.4
DEPDC5O75140 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC30.03■■■□□ 2.4
DEPDC5O75140 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC30.03■■■□□ 2.4
DEPDC5O75140 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC30.03■■■□□ 2.4
DEPDC5O75140 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC30.03■■■□□ 2.4
DEPDC5O75140 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC30.03■■■□□ 2.4
DEPDC5O75140 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC30.03■■■□□ 2.4
DEPDC5O75140 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC30.03■■■□□ 2.4
DEPDC5O75140 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC30.03■■■□□ 2.4
DEPDC5O75140 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC30.03■■■□□ 2.4
DEPDC5O75140 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC30.03■■■□□ 2.4
DEPDC5O75140 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC30.03■■■□□ 2.4
DEPDC5O75140 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC30.02■■■□□ 2.4
DEPDC5O75140 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC30.02■■■□□ 2.4
DEPDC5O75140 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC30.02■■■□□ 2.4
DEPDC5O75140 AL390719.1-204ENST00000412397 1219 ntBASIC30.02■■■□□ 2.4
DEPDC5O75140 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC30.02■■■□□ 2.4
DEPDC5O75140 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC30.02■■■□□ 2.4
DEPDC5O75140 AC023632.3-201ENST00000521633 145 ntBASIC30.02■■■□□ 2.4
DEPDC5O75140 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC30.02■■■□□ 2.4
DEPDC5O75140 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC30.02■■■□□ 2.4
DEPDC5O75140 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC30.02■■■□□ 2.4
DEPDC5O75140 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC30.01■■■□□ 2.39
DEPDC5O75140 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC30.01■■■□□ 2.39
DEPDC5O75140 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC30.01■■■□□ 2.39
DEPDC5O75140 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC30.01■■■□□ 2.39
DEPDC5O75140 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC30.01■■■□□ 2.39
DEPDC5O75140 PRKY-204ENST00000533551 1019 ntBASIC30.01■■■□□ 2.39
DEPDC5O75140 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC30.01■■■□□ 2.39
DEPDC5O75140 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC30.01■■■□□ 2.39
DEPDC5O75140 TUB-203ENST00000534099 1759 ntTSL 2 BASIC30.01■■■□□ 2.39
DEPDC5O75140 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC30■■■□□ 2.39
DEPDC5O75140 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC30■■■□□ 2.39
DEPDC5O75140 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC30■■■□□ 2.39
DEPDC5O75140 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC30■■■□□ 2.39
DEPDC5O75140 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC30■■■□□ 2.39
DEPDC5O75140 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC30■■■□□ 2.39
DEPDC5O75140 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC30■■■□□ 2.39
DEPDC5O75140 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC30■■■□□ 2.39
DEPDC5O75140 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC30■■■□□ 2.39
DEPDC5O75140 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC30■■■□□ 2.39
DEPDC5O75140 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC30■■■□□ 2.39
DEPDC5O75140 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC30■■■□□ 2.39
DEPDC5O75140 TMPOP1-202ENST00000424642 1267 ntBASIC30■■■□□ 2.39
DEPDC5O75140 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC30■■■□□ 2.39
DEPDC5O75140 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC30■■■□□ 2.39
DEPDC5O75140 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC30■■■□□ 2.39
DEPDC5O75140 AL121906.2-201ENST00000621597 723 ntBASIC30■■■□□ 2.39
DEPDC5O75140 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC29.99■■■□□ 2.39
DEPDC5O75140 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC29.99■■■□□ 2.39
DEPDC5O75140 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC29.99■■■□□ 2.39
DEPDC5O75140 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC29.99■■■□□ 2.39
DEPDC5O75140 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC29.99■■■□□ 2.39
DEPDC5O75140 AP001412.1-201ENST00000608405 714 ntBASIC29.99■■■□□ 2.39
DEPDC5O75140 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC29.99■■■□□ 2.39
DEPDC5O75140 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC29.99■■■□□ 2.39
DEPDC5O75140 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC29.98■■■□□ 2.39
DEPDC5O75140 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC29.98■■■□□ 2.39
DEPDC5O75140 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC29.98■■■□□ 2.39
DEPDC5O75140 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC29.98■■■□□ 2.39
DEPDC5O75140 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC29.98■■■□□ 2.39
DEPDC5O75140 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC29.98■■■□□ 2.39
DEPDC5O75140 AC124283.5-201ENST00000624661 1809 ntBASIC29.98■■■□□ 2.39
DEPDC5O75140 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC29.98■■■□□ 2.39
DEPDC5O75140 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC29.98■■■□□ 2.39
DEPDC5O75140 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC29.98■■■□□ 2.39
DEPDC5O75140 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC29.98■■■□□ 2.39
DEPDC5O75140 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC29.98■■■□□ 2.39
DEPDC5O75140 PTBP1P-201ENST00000554374 1601 ntBASIC29.97■■■□□ 2.39
DEPDC5O75140 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC29.97■■■□□ 2.39
DEPDC5O75140 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC29.97■■■□□ 2.39
Retrieved 100 of 98,524 protein–RNA pairs in 20.2 ms