Protein–RNA interactions for Protein: O43638

FOXS1, Forkhead box protein S1, humanhuman

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXS1O43638 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC19.22■□□□□ 0.67
FOXS1O43638 INO80E-214ENST00000620599 515 ntTSL 2 BASIC19.22■□□□□ 0.67
FOXS1O43638 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
FOXS1O43638 AC007225.1-201ENST00000566331 1836 ntBASIC19.22■□□□□ 0.67
FOXS1O43638 USP48-205ENST00000421625 2818 ntTSL 2 BASIC19.22■□□□□ 0.67
FOXS1O43638 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC19.22■□□□□ 0.67
FOXS1O43638 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
FOXS1O43638 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC19.21■□□□□ 0.67
FOXS1O43638 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
FOXS1O43638 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC19.21■□□□□ 0.67
FOXS1O43638 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC19.21■□□□□ 0.67
FOXS1O43638 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
FOXS1O43638 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
FOXS1O43638 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
FOXS1O43638 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
FOXS1O43638 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC19.21■□□□□ 0.67
FOXS1O43638 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
FOXS1O43638 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC19.21■□□□□ 0.67
FOXS1O43638 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC19.21■□□□□ 0.67
FOXS1O43638 BRWD1-AS2-201ENST00000603064 1028 ntBASIC19.21■□□□□ 0.67
FOXS1O43638 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
FOXS1O43638 HLA-B-256ENST00000639848 1089 ntBASIC19.21■□□□□ 0.67
FOXS1O43638 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC19.21■□□□□ 0.67
FOXS1O43638 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC19.21■□□□□ 0.67
FOXS1O43638 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
FOXS1O43638 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
FOXS1O43638 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
FOXS1O43638 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
FOXS1O43638 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
FOXS1O43638 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC19.2■□□□□ 0.66
FOXS1O43638 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
FOXS1O43638 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC19.2■□□□□ 0.66
FOXS1O43638 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC19.2■□□□□ 0.66
FOXS1O43638 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
FOXS1O43638 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC19.2■□□□□ 0.66
FOXS1O43638 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC19.2■□□□□ 0.66
FOXS1O43638 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
FOXS1O43638 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC19.2■□□□□ 0.66
FOXS1O43638 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
FOXS1O43638 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
FOXS1O43638 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
FOXS1O43638 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
FOXS1O43638 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
FOXS1O43638 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
FOXS1O43638 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC19.19■□□□□ 0.66
FOXS1O43638 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
FOXS1O43638 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC19.19■□□□□ 0.66
FOXS1O43638 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
FOXS1O43638 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC19.19■□□□□ 0.66
FOXS1O43638 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC19.19■□□□□ 0.66
FOXS1O43638 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC19.19■□□□□ 0.66
FOXS1O43638 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC19.19■□□□□ 0.66
FOXS1O43638 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
FOXS1O43638 AC060766.5-201ENST00000590539 871 ntBASIC19.19■□□□□ 0.66
FOXS1O43638 BID-203ENST00000399765 1879 ntTSL 2 BASIC19.19■□□□□ 0.66
FOXS1O43638 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
FOXS1O43638 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
FOXS1O43638 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
FOXS1O43638 CRK-204ENST00000574295 1391 ntTSL 5 BASIC19.19■□□□□ 0.66
FOXS1O43638 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
FOXS1O43638 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
FOXS1O43638 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC19.18■□□□□ 0.66
FOXS1O43638 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
FOXS1O43638 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
FOXS1O43638 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
FOXS1O43638 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
FOXS1O43638 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
FOXS1O43638 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC19.18■□□□□ 0.66
FOXS1O43638 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
FOXS1O43638 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
FOXS1O43638 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC19.18■□□□□ 0.66
FOXS1O43638 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
FOXS1O43638 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC19.18■□□□□ 0.66
FOXS1O43638 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
FOXS1O43638 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC19.18■□□□□ 0.66
FOXS1O43638 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
FOXS1O43638 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC19.18■□□□□ 0.66
FOXS1O43638 TSPY20P-201ENST00000450910 630 ntBASIC19.18■□□□□ 0.66
FOXS1O43638 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
FOXS1O43638 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
FOXS1O43638 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
FOXS1O43638 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
FOXS1O43638 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
FOXS1O43638 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC19.18■□□□□ 0.66
FOXS1O43638 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
FOXS1O43638 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
FOXS1O43638 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
FOXS1O43638 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
FOXS1O43638 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
FOXS1O43638 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
FOXS1O43638 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC19.17■□□□□ 0.66
FOXS1O43638 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC19.17■□□□□ 0.66
FOXS1O43638 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
FOXS1O43638 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC19.17■□□□□ 0.66
FOXS1O43638 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC19.17■□□□□ 0.66
FOXS1O43638 SERP1-205ENST00000487153 657 ntTSL 4 BASIC19.17■□□□□ 0.66
FOXS1O43638 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
FOXS1O43638 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC19.17■□□□□ 0.66
FOXS1O43638 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC19.17■□□□□ 0.66
FOXS1O43638 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC19.17■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 16.3 ms