Protein–RNA interactions for Protein: O15041

SEMA3E, Semaphorin-3E, humanhuman

Predictions only

Length 775 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3EO15041 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
SEMA3EO15041 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC24.65■■□□□ 1.54
SEMA3EO15041 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
SEMA3EO15041 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC24.65■■□□□ 1.54
SEMA3EO15041 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC24.65■■□□□ 1.54
SEMA3EO15041 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC24.65■■□□□ 1.54
SEMA3EO15041 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC24.65■■□□□ 1.54
SEMA3EO15041 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC24.65■■□□□ 1.54
SEMA3EO15041 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC24.65■■□□□ 1.54
SEMA3EO15041 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC24.65■■□□□ 1.54
SEMA3EO15041 RN7SL471P-201ENST00000580476 299 ntBASIC24.65■■□□□ 1.54
SEMA3EO15041 AP006294.2-201ENST00000641667 209 ntBASIC24.65■■□□□ 1.54
SEMA3EO15041 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC24.64■■□□□ 1.54
SEMA3EO15041 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.54
SEMA3EO15041 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC24.64■■□□□ 1.54
SEMA3EO15041 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.54
SEMA3EO15041 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC24.64■■□□□ 1.54
SEMA3EO15041 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC24.64■■□□□ 1.54
SEMA3EO15041 BAALC-201ENST00000297574 801 ntTSL 3 BASIC24.64■■□□□ 1.54
SEMA3EO15041 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC24.64■■□□□ 1.54
SEMA3EO15041 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC24.64■■□□□ 1.54
SEMA3EO15041 ABHD17AP6-201ENST00000458502 1044 ntBASIC24.64■■□□□ 1.54
SEMA3EO15041 RNF121-214ENST00000533380 870 ntTSL 3 BASIC24.64■■□□□ 1.54
SEMA3EO15041 AL359736.2-201ENST00000621992 437 ntBASIC24.64■■□□□ 1.54
SEMA3EO15041 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC24.64■■□□□ 1.54
SEMA3EO15041 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC24.64■■□□□ 1.53
SEMA3EO15041 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.53
SEMA3EO15041 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC24.64■■□□□ 1.53
SEMA3EO15041 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC24.64■■□□□ 1.53
SEMA3EO15041 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC24.64■■□□□ 1.53
SEMA3EO15041 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC24.64■■□□□ 1.53
SEMA3EO15041 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC24.64■■□□□ 1.53
SEMA3EO15041 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC24.64■■□□□ 1.53
SEMA3EO15041 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC24.63■■□□□ 1.53
SEMA3EO15041 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC24.63■■□□□ 1.53
SEMA3EO15041 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
SEMA3EO15041 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC24.63■■□□□ 1.53
SEMA3EO15041 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC24.63■■□□□ 1.53
SEMA3EO15041 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC24.63■■□□□ 1.53
SEMA3EO15041 AC233263.1-201ENST00000578059 224 ntBASIC24.63■■□□□ 1.53
SEMA3EO15041 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
SEMA3EO15041 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
SEMA3EO15041 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC24.63■■□□□ 1.53
SEMA3EO15041 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC24.63■■□□□ 1.53
SEMA3EO15041 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC24.63■■□□□ 1.53
SEMA3EO15041 STK25-205ENST00000405883 1904 ntTSL 2 BASIC24.63■■□□□ 1.53
SEMA3EO15041 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC24.63■■□□□ 1.53
SEMA3EO15041 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC24.62■■□□□ 1.53
SEMA3EO15041 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
SEMA3EO15041 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC24.62■■□□□ 1.53
SEMA3EO15041 AL390719.1-204ENST00000412397 1219 ntBASIC24.62■■□□□ 1.53
SEMA3EO15041 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC24.62■■□□□ 1.53
SEMA3EO15041 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC24.62■■□□□ 1.53
SEMA3EO15041 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
SEMA3EO15041 AC120498.8-201ENST00000614275 531 ntBASIC24.62■■□□□ 1.53
SEMA3EO15041 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
SEMA3EO15041 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC24.62■■□□□ 1.53
SEMA3EO15041 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC24.62■■□□□ 1.53
SEMA3EO15041 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
SEMA3EO15041 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC24.61■■□□□ 1.53
SEMA3EO15041 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC24.61■■□□□ 1.53
SEMA3EO15041 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC24.61■■□□□ 1.53
SEMA3EO15041 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
SEMA3EO15041 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
SEMA3EO15041 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
SEMA3EO15041 RER1-204ENST00000378518 522 ntTSL 3 BASIC24.61■■□□□ 1.53
SEMA3EO15041 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC24.61■■□□□ 1.53
SEMA3EO15041 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC24.61■■□□□ 1.53
SEMA3EO15041 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC24.61■■□□□ 1.53
SEMA3EO15041 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
SEMA3EO15041 AC023632.3-201ENST00000521633 145 ntBASIC24.61■■□□□ 1.53
SEMA3EO15041 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC24.61■■□□□ 1.53
SEMA3EO15041 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC24.61■■□□□ 1.53
SEMA3EO15041 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
SEMA3EO15041 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC24.61■■□□□ 1.53
SEMA3EO15041 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
SEMA3EO15041 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
SEMA3EO15041 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
SEMA3EO15041 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
SEMA3EO15041 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC24.6■■□□□ 1.53
SEMA3EO15041 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC24.6■■□□□ 1.53
SEMA3EO15041 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
SEMA3EO15041 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC24.6■■□□□ 1.53
SEMA3EO15041 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC24.6■■□□□ 1.53
SEMA3EO15041 UBE2SP1-201ENST00000450587 669 ntBASIC24.6■■□□□ 1.53
SEMA3EO15041 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC24.6■■□□□ 1.53
SEMA3EO15041 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC24.6■■□□□ 1.53
SEMA3EO15041 RPPH1-201ENST00000516869 333 ntBASIC24.6■■□□□ 1.53
SEMA3EO15041 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC24.6■■□□□ 1.53
SEMA3EO15041 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
SEMA3EO15041 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC24.6■■□□□ 1.53
SEMA3EO15041 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC24.6■■□□□ 1.53
SEMA3EO15041 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC24.6■■□□□ 1.53
SEMA3EO15041 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC24.6■■□□□ 1.53
SEMA3EO15041 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC24.6■■□□□ 1.53
SEMA3EO15041 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC24.59■■□□□ 1.53
SEMA3EO15041 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC24.59■■□□□ 1.53
SEMA3EO15041 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC24.59■■□□□ 1.53
SEMA3EO15041 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC24.59■■□□□ 1.53
SEMA3EO15041 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC24.59■■□□□ 1.53
Retrieved 100 of 98,524 protein–RNA pairs in 57 ms