Protein–RNA interactions for Protein: O00442

RTCA, RNA 3'-terminal phosphate cyclase, humanhuman

Known RBP Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTCAO00442 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
RTCAO00442 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC19.44■□□□□ 0.7
RTCAO00442 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
RTCAO00442 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC19.43■□□□□ 0.7
RTCAO00442 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
RTCAO00442 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC19.43■□□□□ 0.7
RTCAO00442 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
RTCAO00442 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
RTCAO00442 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
RTCAO00442 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC19.43■□□□□ 0.7
RTCAO00442 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
RTCAO00442 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
RTCAO00442 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC19.43■□□□□ 0.7
RTCAO00442 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC19.43■□□□□ 0.7
RTCAO00442 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC19.43■□□□□ 0.7
RTCAO00442 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
RTCAO00442 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC19.43■□□□□ 0.7
RTCAO00442 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC19.43■□□□□ 0.7
RTCAO00442 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC19.43■□□□□ 0.7
RTCAO00442 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
RTCAO00442 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC19.43■□□□□ 0.7
RTCAO00442 AC005181.1-201ENST00000604782 1256 ntBASIC19.43■□□□□ 0.7
RTCAO00442 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
RTCAO00442 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC19.43■□□□□ 0.7
RTCAO00442 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
RTCAO00442 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC19.43■□□□□ 0.7
RTCAO00442 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
RTCAO00442 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC19.43■□□□□ 0.7
RTCAO00442 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
RTCAO00442 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
RTCAO00442 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC19.42■□□□□ 0.7
RTCAO00442 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
RTCAO00442 CYP21A1P-202ENST00000354927 1481 ntBASIC19.42■□□□□ 0.7
RTCAO00442 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC19.42■□□□□ 0.7
RTCAO00442 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC19.42■□□□□ 0.7
RTCAO00442 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
RTCAO00442 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
RTCAO00442 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
RTCAO00442 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
RTCAO00442 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
RTCAO00442 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
RTCAO00442 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
RTCAO00442 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
RTCAO00442 AC020907.5-201ENST00000624372 1936 ntBASIC19.42■□□□□ 0.7
RTCAO00442 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
RTCAO00442 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
RTCAO00442 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
RTCAO00442 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
RTCAO00442 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC19.42■□□□□ 0.7
RTCAO00442 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC19.41■□□□□ 0.7
RTCAO00442 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
RTCAO00442 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
RTCAO00442 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC19.41■□□□□ 0.7
RTCAO00442 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
RTCAO00442 GABARAPL3-202ENST00000624044 1851 ntBASIC19.41■□□□□ 0.7
RTCAO00442 LINC01521-201ENST00000504184 1943 ntBASIC19.41■□□□□ 0.7
RTCAO00442 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC19.41■□□□□ 0.7
RTCAO00442 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
RTCAO00442 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC19.41■□□□□ 0.7
RTCAO00442 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC19.41■□□□□ 0.7
RTCAO00442 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC19.41■□□□□ 0.7
RTCAO00442 RAP2CP1-201ENST00000605103 478 ntBASIC19.41■□□□□ 0.7
RTCAO00442 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC19.41■□□□□ 0.7
RTCAO00442 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
RTCAO00442 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC19.41■□□□□ 0.7
RTCAO00442 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC19.41■□□□□ 0.7
RTCAO00442 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
RTCAO00442 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
RTCAO00442 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC19.41■□□□□ 0.7
RTCAO00442 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC19.41■□□□□ 0.7
RTCAO00442 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
RTCAO00442 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
RTCAO00442 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
RTCAO00442 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC19.4■□□□□ 0.7
RTCAO00442 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
RTCAO00442 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
RTCAO00442 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
RTCAO00442 DET1-207ENST00000564406 2315 ntTSL 2 BASIC19.4■□□□□ 0.7
RTCAO00442 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
RTCAO00442 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
RTCAO00442 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
RTCAO00442 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
RTCAO00442 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
RTCAO00442 MIR663A-201ENST00000385250 93 ntBASIC19.4■□□□□ 0.7
RTCAO00442 BET1L-204ENST00000410108 637 ntTSL 3 BASIC19.4■□□□□ 0.7
RTCAO00442 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
RTCAO00442 AC026185.1-201ENST00000445748 174 ntBASIC19.4■□□□□ 0.7
RTCAO00442 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
RTCAO00442 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC19.4■□□□□ 0.7
RTCAO00442 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
RTCAO00442 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC19.4■□□□□ 0.7
RTCAO00442 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC19.4■□□□□ 0.7
RTCAO00442 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
RTCAO00442 AL050303.2-201ENST00000619798 666 ntBASIC19.4■□□□□ 0.7
RTCAO00442 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
RTCAO00442 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
RTCAO00442 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
RTCAO00442 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC19.4■□□□□ 0.7
RTCAO00442 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC19.4■□□□□ 0.7
RTCAO00442 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 37.2 ms