Protein–RNA interactions for Protein: O00203

AP3B1, AP-3 complex subunit beta-1, humanhuman

Predictions only

Length 1,094 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3B1O00203 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC20.58■□□□□ 0.88
AP3B1O00203 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.88
AP3B1O00203 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC20.58■□□□□ 0.88
AP3B1O00203 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC20.58■□□□□ 0.88
AP3B1O00203 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
AP3B1O00203 AL512408.1-201ENST00000569378 2000 ntBASIC20.58■□□□□ 0.88
AP3B1O00203 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
AP3B1O00203 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
AP3B1O00203 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.88
AP3B1O00203 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
AP3B1O00203 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
AP3B1O00203 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
AP3B1O00203 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
AP3B1O00203 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
AP3B1O00203 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC20.57■□□□□ 0.88
AP3B1O00203 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC20.57■□□□□ 0.88
AP3B1O00203 AC007322.4-201ENST00000509611 723 ntBASIC20.57■□□□□ 0.88
AP3B1O00203 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC20.57■□□□□ 0.88
AP3B1O00203 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC20.57■□□□□ 0.88
AP3B1O00203 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
AP3B1O00203 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
AP3B1O00203 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC20.57■□□□□ 0.88
AP3B1O00203 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
AP3B1O00203 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
AP3B1O00203 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC20.56■□□□□ 0.88
AP3B1O00203 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC20.56■□□□□ 0.88
AP3B1O00203 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
AP3B1O00203 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
AP3B1O00203 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC20.56■□□□□ 0.88
AP3B1O00203 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
AP3B1O00203 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
AP3B1O00203 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC20.56■□□□□ 0.88
AP3B1O00203 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
AP3B1O00203 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
AP3B1O00203 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
AP3B1O00203 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC20.56■□□□□ 0.88
AP3B1O00203 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
AP3B1O00203 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC20.56■□□□□ 0.88
AP3B1O00203 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC20.56■□□□□ 0.88
AP3B1O00203 AC013268.1-206ENST00000638368 961 ntBASIC20.56■□□□□ 0.88
AP3B1O00203 AC112229.1-201ENST00000639295 961 ntBASIC20.56■□□□□ 0.88
AP3B1O00203 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC20.56■□□□□ 0.88
AP3B1O00203 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
AP3B1O00203 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
AP3B1O00203 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
AP3B1O00203 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
AP3B1O00203 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
AP3B1O00203 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC20.56■□□□□ 0.88
AP3B1O00203 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC20.56■□□□□ 0.88
AP3B1O00203 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
AP3B1O00203 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC20.55■□□□□ 0.88
AP3B1O00203 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
AP3B1O00203 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC20.55■□□□□ 0.88
AP3B1O00203 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
AP3B1O00203 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
AP3B1O00203 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
AP3B1O00203 HACD1-201ENST00000326961 773 ntTSL 2 BASIC20.55■□□□□ 0.88
AP3B1O00203 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
AP3B1O00203 BRI3-207ENST00000539286 699 ntTSL 2 BASIC20.55■□□□□ 0.88
AP3B1O00203 DBI-210ENST00000542275 757 ntTSL 5 BASIC20.55■□□□□ 0.88
AP3B1O00203 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC20.55■□□□□ 0.88
AP3B1O00203 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
AP3B1O00203 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
AP3B1O00203 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
AP3B1O00203 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC20.55■□□□□ 0.88
AP3B1O00203 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
AP3B1O00203 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC20.55■□□□□ 0.88
AP3B1O00203 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
AP3B1O00203 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC20.55■□□□□ 0.88
AP3B1O00203 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC20.55■□□□□ 0.88
AP3B1O00203 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
AP3B1O00203 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC20.54■□□□□ 0.88
AP3B1O00203 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
AP3B1O00203 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
AP3B1O00203 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC20.54■□□□□ 0.88
AP3B1O00203 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC20.54■□□□□ 0.88
AP3B1O00203 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
AP3B1O00203 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
AP3B1O00203 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
AP3B1O00203 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
AP3B1O00203 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
AP3B1O00203 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
AP3B1O00203 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
AP3B1O00203 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
AP3B1O00203 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
AP3B1O00203 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
AP3B1O00203 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
AP3B1O00203 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC20.53■□□□□ 0.88
AP3B1O00203 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
AP3B1O00203 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
AP3B1O00203 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
AP3B1O00203 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC20.53■□□□□ 0.88
AP3B1O00203 USP39-204ENST00000409766 2033 ntTSL 2 BASIC20.53■□□□□ 0.88
AP3B1O00203 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
AP3B1O00203 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
AP3B1O00203 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC20.53■□□□□ 0.88
AP3B1O00203 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
AP3B1O00203 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC20.52■□□□□ 0.88
AP3B1O00203 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.88
AP3B1O00203 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 39.4 ms