Protein–RNA interactions for Protein: H3BSU7

TMX2-CTNND1, TMX2-CTNND1 readthrough (NMD candidate), humanhuman

Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMX2-CTNND1H3BSU7 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC19.96■□□□□ 0.79
TMX2-CTNND1H3BSU7 AL158047.1-201ENST00000445918 881 ntBASIC19.96■□□□□ 0.79
TMX2-CTNND1H3BSU7 NME6-213ENST00000451657 871 ntTSL 2 BASIC19.96■□□□□ 0.79
TMX2-CTNND1H3BSU7 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC19.96■□□□□ 0.79
TMX2-CTNND1H3BSU7 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
TMX2-CTNND1H3BSU7 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
TMX2-CTNND1H3BSU7 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
TMX2-CTNND1H3BSU7 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC19.96■□□□□ 0.79
TMX2-CTNND1H3BSU7 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
TMX2-CTNND1H3BSU7 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
TMX2-CTNND1H3BSU7 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
TMX2-CTNND1H3BSU7 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC19.95■□□□□ 0.78
TMX2-CTNND1H3BSU7 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
TMX2-CTNND1H3BSU7 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
TMX2-CTNND1H3BSU7 MCRIP2P1-201ENST00000394346 511 ntBASIC19.95■□□□□ 0.78
TMX2-CTNND1H3BSU7 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC19.95■□□□□ 0.78
TMX2-CTNND1H3BSU7 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC19.95■□□□□ 0.78
TMX2-CTNND1H3BSU7 AC060766.5-201ENST00000590539 871 ntBASIC19.95■□□□□ 0.78
TMX2-CTNND1H3BSU7 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC19.95■□□□□ 0.78
TMX2-CTNND1H3BSU7 HLA-B-256ENST00000639848 1089 ntBASIC19.95■□□□□ 0.78
TMX2-CTNND1H3BSU7 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
TMX2-CTNND1H3BSU7 LINC01521-201ENST00000504184 1943 ntBASIC19.95■□□□□ 0.78
TMX2-CTNND1H3BSU7 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC19.95■□□□□ 0.78
TMX2-CTNND1H3BSU7 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
TMX2-CTNND1H3BSU7 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
TMX2-CTNND1H3BSU7 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC19.95■□□□□ 0.78
TMX2-CTNND1H3BSU7 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC19.95■□□□□ 0.78
TMX2-CTNND1H3BSU7 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
TMX2-CTNND1H3BSU7 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
TMX2-CTNND1H3BSU7 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
TMX2-CTNND1H3BSU7 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
TMX2-CTNND1H3BSU7 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC19.94■□□□□ 0.78
TMX2-CTNND1H3BSU7 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
TMX2-CTNND1H3BSU7 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC19.94■□□□□ 0.78
TMX2-CTNND1H3BSU7 SAPCD2P1-201ENST00000395413 1184 ntBASIC19.94■□□□□ 0.78
TMX2-CTNND1H3BSU7 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC19.94■□□□□ 0.78
TMX2-CTNND1H3BSU7 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC19.94■□□□□ 0.78
TMX2-CTNND1H3BSU7 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC19.94■□□□□ 0.78
TMX2-CTNND1H3BSU7 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC19.94■□□□□ 0.78
TMX2-CTNND1H3BSU7 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
TMX2-CTNND1H3BSU7 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC19.94■□□□□ 0.78
TMX2-CTNND1H3BSU7 MCC-208ENST00000514701 2855 ntTSL 2 BASIC19.94■□□□□ 0.78
TMX2-CTNND1H3BSU7 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
TMX2-CTNND1H3BSU7 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
TMX2-CTNND1H3BSU7 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
TMX2-CTNND1H3BSU7 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
TMX2-CTNND1H3BSU7 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC19.94■□□□□ 0.78
TMX2-CTNND1H3BSU7 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC19.94■□□□□ 0.78
TMX2-CTNND1H3BSU7 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
TMX2-CTNND1H3BSU7 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC19.93■□□□□ 0.78
TMX2-CTNND1H3BSU7 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC19.93■□□□□ 0.78
TMX2-CTNND1H3BSU7 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
TMX2-CTNND1H3BSU7 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC19.93■□□□□ 0.78
TMX2-CTNND1H3BSU7 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
TMX2-CTNND1H3BSU7 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
TMX2-CTNND1H3BSU7 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
TMX2-CTNND1H3BSU7 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC19.93■□□□□ 0.78
TMX2-CTNND1H3BSU7 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
TMX2-CTNND1H3BSU7 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
TMX2-CTNND1H3BSU7 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC19.93■□□□□ 0.78
TMX2-CTNND1H3BSU7 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
TMX2-CTNND1H3BSU7 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
TMX2-CTNND1H3BSU7 AF106564.1-201ENST00000607058 2553 ntBASIC19.93■□□□□ 0.78
TMX2-CTNND1H3BSU7 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
TMX2-CTNND1H3BSU7 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
TMX2-CTNND1H3BSU7 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC19.93■□□□□ 0.78
TMX2-CTNND1H3BSU7 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
TMX2-CTNND1H3BSU7 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC19.92■□□□□ 0.78
TMX2-CTNND1H3BSU7 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
TMX2-CTNND1H3BSU7 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
TMX2-CTNND1H3BSU7 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
TMX2-CTNND1H3BSU7 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC19.92■□□□□ 0.78
TMX2-CTNND1H3BSU7 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC19.92■□□□□ 0.78
TMX2-CTNND1H3BSU7 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC19.92■□□□□ 0.78
TMX2-CTNND1H3BSU7 RPS2P4-201ENST00000476944 856 ntBASIC19.92■□□□□ 0.78
TMX2-CTNND1H3BSU7 HES2-205ENST00000487437 968 ntTSL 3 BASIC19.92■□□□□ 0.78
TMX2-CTNND1H3BSU7 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC19.92■□□□□ 0.78
TMX2-CTNND1H3BSU7 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC19.92■□□□□ 0.78
TMX2-CTNND1H3BSU7 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC19.92■□□□□ 0.78
TMX2-CTNND1H3BSU7 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC19.92■□□□□ 0.78
TMX2-CTNND1H3BSU7 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC19.92■□□□□ 0.78
TMX2-CTNND1H3BSU7 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC19.92■□□□□ 0.78
TMX2-CTNND1H3BSU7 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
TMX2-CTNND1H3BSU7 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
TMX2-CTNND1H3BSU7 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
TMX2-CTNND1H3BSU7 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
TMX2-CTNND1H3BSU7 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
TMX2-CTNND1H3BSU7 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
TMX2-CTNND1H3BSU7 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC19.91■□□□□ 0.78
TMX2-CTNND1H3BSU7 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC19.91■□□□□ 0.78
TMX2-CTNND1H3BSU7 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC19.91■□□□□ 0.78
TMX2-CTNND1H3BSU7 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC19.91■□□□□ 0.78
TMX2-CTNND1H3BSU7 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC19.91■□□□□ 0.78
TMX2-CTNND1H3BSU7 UBE2SP1-201ENST00000450587 669 ntBASIC19.91■□□□□ 0.78
TMX2-CTNND1H3BSU7 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC19.91■□□□□ 0.78
TMX2-CTNND1H3BSU7 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
TMX2-CTNND1H3BSU7 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC19.91■□□□□ 0.78
TMX2-CTNND1H3BSU7 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC19.91■□□□□ 0.78
TMX2-CTNND1H3BSU7 AC073648.6-201ENST00000641589 218 ntBASIC19.91■□□□□ 0.78
TMX2-CTNND1H3BSU7 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 39.2 ms