Protein–RNA interactions for Protein: E9PGA6

C1QTNF3-AMACR, C1QTNF3-AMACR readthrough (NMD candidate), humanhuman

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C1QTNF3-AMACRE9PGA6 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.86
C1QTNF3-AMACRE9PGA6 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC20.45■□□□□ 0.86
C1QTNF3-AMACRE9PGA6 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
C1QTNF3-AMACRE9PGA6 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
C1QTNF3-AMACRE9PGA6 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC20.45■□□□□ 0.86
C1QTNF3-AMACRE9PGA6 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC20.45■□□□□ 0.86
C1QTNF3-AMACRE9PGA6 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
C1QTNF3-AMACRE9PGA6 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
C1QTNF3-AMACRE9PGA6 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
C1QTNF3-AMACRE9PGA6 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
C1QTNF3-AMACRE9PGA6 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC20.45■□□□□ 0.86
C1QTNF3-AMACRE9PGA6 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC20.45■□□□□ 0.86
C1QTNF3-AMACRE9PGA6 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
C1QTNF3-AMACRE9PGA6 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC20.45■□□□□ 0.86
C1QTNF3-AMACRE9PGA6 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
C1QTNF3-AMACRE9PGA6 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.86
C1QTNF3-AMACRE9PGA6 FEM1AP4-201ENST00000443167 1987 ntBASIC20.45■□□□□ 0.86
C1QTNF3-AMACRE9PGA6 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
C1QTNF3-AMACRE9PGA6 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
C1QTNF3-AMACRE9PGA6 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
C1QTNF3-AMACRE9PGA6 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
C1QTNF3-AMACRE9PGA6 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC20.44■□□□□ 0.86
C1QTNF3-AMACRE9PGA6 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC20.44■□□□□ 0.86
C1QTNF3-AMACRE9PGA6 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
C1QTNF3-AMACRE9PGA6 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
C1QTNF3-AMACRE9PGA6 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC20.44■□□□□ 0.86
C1QTNF3-AMACRE9PGA6 AL390719.1-204ENST00000412397 1219 ntBASIC20.44■□□□□ 0.86
C1QTNF3-AMACRE9PGA6 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
C1QTNF3-AMACRE9PGA6 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
C1QTNF3-AMACRE9PGA6 AC098590.1-201ENST00000468126 897 ntBASIC20.44■□□□□ 0.86
C1QTNF3-AMACRE9PGA6 SERP1-205ENST00000487153 657 ntTSL 4 BASIC20.44■□□□□ 0.86
C1QTNF3-AMACRE9PGA6 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC20.44■□□□□ 0.86
C1QTNF3-AMACRE9PGA6 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
C1QTNF3-AMACRE9PGA6 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
C1QTNF3-AMACRE9PGA6 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
C1QTNF3-AMACRE9PGA6 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC20.43■□□□□ 0.86
C1QTNF3-AMACRE9PGA6 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC20.43■□□□□ 0.86
C1QTNF3-AMACRE9PGA6 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC20.43■□□□□ 0.86
C1QTNF3-AMACRE9PGA6 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC20.43■□□□□ 0.86
C1QTNF3-AMACRE9PGA6 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
C1QTNF3-AMACRE9PGA6 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
C1QTNF3-AMACRE9PGA6 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
C1QTNF3-AMACRE9PGA6 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
C1QTNF3-AMACRE9PGA6 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC20.43■□□□□ 0.86
C1QTNF3-AMACRE9PGA6 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC20.43■□□□□ 0.86
C1QTNF3-AMACRE9PGA6 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
C1QTNF3-AMACRE9PGA6 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
C1QTNF3-AMACRE9PGA6 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
C1QTNF3-AMACRE9PGA6 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
C1QTNF3-AMACRE9PGA6 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC20.43■□□□□ 0.86
C1QTNF3-AMACRE9PGA6 GCSHP5-201ENST00000443090 522 ntBASIC20.43■□□□□ 0.86
C1QTNF3-AMACRE9PGA6 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC20.43■□□□□ 0.86
C1QTNF3-AMACRE9PGA6 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC20.43■□□□□ 0.86
C1QTNF3-AMACRE9PGA6 AC142381.4-202ENST00000563973 229 ntBASIC20.43■□□□□ 0.86
C1QTNF3-AMACRE9PGA6 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC20.43■□□□□ 0.86
C1QTNF3-AMACRE9PGA6 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
C1QTNF3-AMACRE9PGA6 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC20.43■□□□□ 0.86
C1QTNF3-AMACRE9PGA6 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC20.43■□□□□ 0.86
C1QTNF3-AMACRE9PGA6 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC20.43■□□□□ 0.86
C1QTNF3-AMACRE9PGA6 KRT8P36-201ENST00000489121 1440 ntBASIC20.43■□□□□ 0.86
C1QTNF3-AMACRE9PGA6 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
C1QTNF3-AMACRE9PGA6 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC20.43■□□□□ 0.86
C1QTNF3-AMACRE9PGA6 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
C1QTNF3-AMACRE9PGA6 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC20.42■□□□□ 0.86
C1QTNF3-AMACRE9PGA6 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
C1QTNF3-AMACRE9PGA6 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
C1QTNF3-AMACRE9PGA6 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
C1QTNF3-AMACRE9PGA6 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
C1QTNF3-AMACRE9PGA6 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
C1QTNF3-AMACRE9PGA6 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
C1QTNF3-AMACRE9PGA6 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
C1QTNF3-AMACRE9PGA6 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
C1QTNF3-AMACRE9PGA6 AC005829.2-201ENST00000571422 1056 ntBASIC20.42■□□□□ 0.86
C1QTNF3-AMACRE9PGA6 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
C1QTNF3-AMACRE9PGA6 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
C1QTNF3-AMACRE9PGA6 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
C1QTNF3-AMACRE9PGA6 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
C1QTNF3-AMACRE9PGA6 STK25-205ENST00000405883 1904 ntTSL 2 BASIC20.41■□□□□ 0.86
C1QTNF3-AMACRE9PGA6 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
C1QTNF3-AMACRE9PGA6 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
C1QTNF3-AMACRE9PGA6 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
C1QTNF3-AMACRE9PGA6 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
C1QTNF3-AMACRE9PGA6 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
C1QTNF3-AMACRE9PGA6 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
C1QTNF3-AMACRE9PGA6 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC20.41■□□□□ 0.86
C1QTNF3-AMACRE9PGA6 AL158047.1-201ENST00000445918 881 ntBASIC20.41■□□□□ 0.86
C1QTNF3-AMACRE9PGA6 RPS2P52-201ENST00000469610 820 ntBASIC20.41■□□□□ 0.86
C1QTNF3-AMACRE9PGA6 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
C1QTNF3-AMACRE9PGA6 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
C1QTNF3-AMACRE9PGA6 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC20.41■□□□□ 0.86
C1QTNF3-AMACRE9PGA6 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC20.41■□□□□ 0.86
C1QTNF3-AMACRE9PGA6 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC20.41■□□□□ 0.86
C1QTNF3-AMACRE9PGA6 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC20.41■□□□□ 0.86
C1QTNF3-AMACRE9PGA6 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC20.41■□□□□ 0.86
C1QTNF3-AMACRE9PGA6 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
C1QTNF3-AMACRE9PGA6 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
C1QTNF3-AMACRE9PGA6 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
C1QTNF3-AMACRE9PGA6 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
C1QTNF3-AMACRE9PGA6 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
C1QTNF3-AMACRE9PGA6 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 31 ms