Protein–RNA interactions for Protein: A6NM62

LRRC53, Leucine-rich repeat-containing protein 53, humanhuman

Predictions only

Length 1,247 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC53A6NM62 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC21.94■■□□□ 1.1
LRRC53A6NM62 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC21.94■■□□□ 1.1
LRRC53A6NM62 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
LRRC53A6NM62 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
LRRC53A6NM62 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC21.94■■□□□ 1.1
LRRC53A6NM62 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC21.94■■□□□ 1.1
LRRC53A6NM62 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC21.94■■□□□ 1.1
LRRC53A6NM62 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
LRRC53A6NM62 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC21.93■■□□□ 1.1
LRRC53A6NM62 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC21.93■■□□□ 1.1
LRRC53A6NM62 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC21.93■■□□□ 1.1
LRRC53A6NM62 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC21.93■■□□□ 1.1
LRRC53A6NM62 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC21.93■■□□□ 1.1
LRRC53A6NM62 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC21.93■■□□□ 1.1
LRRC53A6NM62 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC21.93■■□□□ 1.1
LRRC53A6NM62 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC21.93■■□□□ 1.1
LRRC53A6NM62 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC21.93■■□□□ 1.1
LRRC53A6NM62 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
LRRC53A6NM62 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC21.92■■□□□ 1.1
LRRC53A6NM62 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
LRRC53A6NM62 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC21.92■■□□□ 1.1
LRRC53A6NM62 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
LRRC53A6NM62 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC21.92■■□□□ 1.1
LRRC53A6NM62 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.1
LRRC53A6NM62 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC21.92■■□□□ 1.1
LRRC53A6NM62 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC21.92■■□□□ 1.1
LRRC53A6NM62 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
LRRC53A6NM62 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC21.92■■□□□ 1.1
LRRC53A6NM62 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC21.92■■□□□ 1.1
LRRC53A6NM62 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC21.92■■□□□ 1.1
LRRC53A6NM62 ZNRF2P3-201ENST00000424200 374 ntBASIC21.92■■□□□ 1.1
LRRC53A6NM62 AC007322.3-201ENST00000426526 701 ntBASIC21.92■■□□□ 1.1
LRRC53A6NM62 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
LRRC53A6NM62 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC21.92■■□□□ 1.1
LRRC53A6NM62 SLC7A5P1-201ENST00000568957 537 ntBASIC21.92■■□□□ 1.1
LRRC53A6NM62 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC21.92■■□□□ 1.1
LRRC53A6NM62 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC21.92■■□□□ 1.1
LRRC53A6NM62 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC21.92■■□□□ 1.1
LRRC53A6NM62 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
LRRC53A6NM62 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.1
LRRC53A6NM62 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC21.92■■□□□ 1.1
LRRC53A6NM62 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
LRRC53A6NM62 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.1
LRRC53A6NM62 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC21.92■■□□□ 1.1
LRRC53A6NM62 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC21.92■■□□□ 1.1
LRRC53A6NM62 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC21.92■■□□□ 1.1
LRRC53A6NM62 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
LRRC53A6NM62 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
LRRC53A6NM62 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
LRRC53A6NM62 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC21.91■■□□□ 1.1
LRRC53A6NM62 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
LRRC53A6NM62 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC21.91■■□□□ 1.1
LRRC53A6NM62 KRT8P36-201ENST00000489121 1440 ntBASIC21.91■■□□□ 1.1
LRRC53A6NM62 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
LRRC53A6NM62 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
LRRC53A6NM62 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
LRRC53A6NM62 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
LRRC53A6NM62 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC21.91■■□□□ 1.1
LRRC53A6NM62 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
LRRC53A6NM62 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC21.91■■□□□ 1.1
LRRC53A6NM62 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC21.91■■□□□ 1.1
LRRC53A6NM62 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC21.91■■□□□ 1.1
LRRC53A6NM62 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC21.91■■□□□ 1.1
LRRC53A6NM62 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
LRRC53A6NM62 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC21.91■■□□□ 1.1
LRRC53A6NM62 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
LRRC53A6NM62 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
LRRC53A6NM62 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
LRRC53A6NM62 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC21.91■■□□□ 1.1
LRRC53A6NM62 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC21.91■■□□□ 1.1
LRRC53A6NM62 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC21.91■■□□□ 1.1
LRRC53A6NM62 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC21.91■■□□□ 1.1
LRRC53A6NM62 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
LRRC53A6NM62 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
LRRC53A6NM62 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
LRRC53A6NM62 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC21.9■■□□□ 1.1
LRRC53A6NM62 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
LRRC53A6NM62 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC21.9■■□□□ 1.1
LRRC53A6NM62 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
LRRC53A6NM62 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
LRRC53A6NM62 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
LRRC53A6NM62 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC21.9■■□□□ 1.1
LRRC53A6NM62 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
LRRC53A6NM62 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC21.9■■□□□ 1.1
LRRC53A6NM62 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC21.9■■□□□ 1.1
LRRC53A6NM62 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC21.9■■□□□ 1.1
LRRC53A6NM62 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC21.9■■□□□ 1.1
LRRC53A6NM62 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC21.9■■□□□ 1.1
LRRC53A6NM62 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
LRRC53A6NM62 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC21.9■■□□□ 1.1
LRRC53A6NM62 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC21.9■■□□□ 1.1
LRRC53A6NM62 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC21.9■■□□□ 1.1
LRRC53A6NM62 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
LRRC53A6NM62 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
LRRC53A6NM62 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC21.89■■□□□ 1.1
LRRC53A6NM62 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
LRRC53A6NM62 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC21.89■■□□□ 1.1
LRRC53A6NM62 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC21.89■■□□□ 1.1
LRRC53A6NM62 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC21.89■■□□□ 1.1
LRRC53A6NM62 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC21.89■■□□□ 1.1
Retrieved 100 of 98,524 protein–RNA pairs in 22.1 ms