Protein–RNA interactions for Protein: A0A576

TCRBV9S1A1T, T-cell receptor beta variable 3-1 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV9S1A1TA0A576 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
TCRBV9S1A1TA0A576 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
TCRBV9S1A1TA0A576 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
TCRBV9S1A1TA0A576 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC20.51■□□□□ 0.87
TCRBV9S1A1TA0A576 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
TCRBV9S1A1TA0A576 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC20.5■□□□□ 0.87
TCRBV9S1A1TA0A576 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC20.5■□□□□ 0.87
TCRBV9S1A1TA0A576 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
TCRBV9S1A1TA0A576 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
TCRBV9S1A1TA0A576 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
TCRBV9S1A1TA0A576 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
TCRBV9S1A1TA0A576 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
TCRBV9S1A1TA0A576 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
TCRBV9S1A1TA0A576 AC105265.2-201ENST00000467189 838 ntBASIC20.5■□□□□ 0.87
TCRBV9S1A1TA0A576 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC20.5■□□□□ 0.87
TCRBV9S1A1TA0A576 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
TCRBV9S1A1TA0A576 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
TCRBV9S1A1TA0A576 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
TCRBV9S1A1TA0A576 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC20.5■□□□□ 0.87
TCRBV9S1A1TA0A576 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC20.5■□□□□ 0.87
TCRBV9S1A1TA0A576 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC20.5■□□□□ 0.87
TCRBV9S1A1TA0A576 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
TCRBV9S1A1TA0A576 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC20.5■□□□□ 0.87
TCRBV9S1A1TA0A576 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
TCRBV9S1A1TA0A576 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
TCRBV9S1A1TA0A576 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
TCRBV9S1A1TA0A576 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC20.49■□□□□ 0.87
TCRBV9S1A1TA0A576 AC125437.2-201ENST00000625180 2167 ntBASIC20.49■□□□□ 0.87
TCRBV9S1A1TA0A576 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
TCRBV9S1A1TA0A576 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
TCRBV9S1A1TA0A576 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
TCRBV9S1A1TA0A576 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC20.49■□□□□ 0.87
TCRBV9S1A1TA0A576 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC20.49■□□□□ 0.87
TCRBV9S1A1TA0A576 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
TCRBV9S1A1TA0A576 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC20.49■□□□□ 0.87
TCRBV9S1A1TA0A576 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC20.49■□□□□ 0.87
TCRBV9S1A1TA0A576 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC20.49■□□□□ 0.87
TCRBV9S1A1TA0A576 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC20.49■□□□□ 0.87
TCRBV9S1A1TA0A576 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC20.49■□□□□ 0.87
TCRBV9S1A1TA0A576 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
TCRBV9S1A1TA0A576 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
TCRBV9S1A1TA0A576 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC20.48■□□□□ 0.87
TCRBV9S1A1TA0A576 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
TCRBV9S1A1TA0A576 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
TCRBV9S1A1TA0A576 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC20.48■□□□□ 0.87
TCRBV9S1A1TA0A576 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC20.48■□□□□ 0.87
TCRBV9S1A1TA0A576 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
TCRBV9S1A1TA0A576 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
TCRBV9S1A1TA0A576 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
TCRBV9S1A1TA0A576 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
TCRBV9S1A1TA0A576 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC20.48■□□□□ 0.87
TCRBV9S1A1TA0A576 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
TCRBV9S1A1TA0A576 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
TCRBV9S1A1TA0A576 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
TCRBV9S1A1TA0A576 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
TCRBV9S1A1TA0A576 LBX2-AS1-202ENST00000603175 2083 ntBASIC20.47■□□□□ 0.87
TCRBV9S1A1TA0A576 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC20.47■□□□□ 0.87
TCRBV9S1A1TA0A576 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
TCRBV9S1A1TA0A576 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
TCRBV9S1A1TA0A576 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC20.47■□□□□ 0.87
TCRBV9S1A1TA0A576 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC20.47■□□□□ 0.87
TCRBV9S1A1TA0A576 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
TCRBV9S1A1TA0A576 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC20.47■□□□□ 0.87
TCRBV9S1A1TA0A576 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC20.47■□□□□ 0.87
TCRBV9S1A1TA0A576 CCDC92B-201ENST00000575506 885 ntBASIC20.47■□□□□ 0.87
TCRBV9S1A1TA0A576 FGF8-207ENST00000618991 856 ntTSL 3 BASIC20.47■□□□□ 0.87
TCRBV9S1A1TA0A576 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
TCRBV9S1A1TA0A576 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
TCRBV9S1A1TA0A576 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC20.47■□□□□ 0.87
TCRBV9S1A1TA0A576 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC20.47■□□□□ 0.87
TCRBV9S1A1TA0A576 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC20.47■□□□□ 0.87
TCRBV9S1A1TA0A576 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC20.47■□□□□ 0.87
TCRBV9S1A1TA0A576 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
TCRBV9S1A1TA0A576 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
TCRBV9S1A1TA0A576 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC20.47■□□□□ 0.87
TCRBV9S1A1TA0A576 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC20.47■□□□□ 0.87
TCRBV9S1A1TA0A576 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
TCRBV9S1A1TA0A576 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
TCRBV9S1A1TA0A576 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC20.46■□□□□ 0.87
TCRBV9S1A1TA0A576 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
TCRBV9S1A1TA0A576 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC20.46■□□□□ 0.87
TCRBV9S1A1TA0A576 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
TCRBV9S1A1TA0A576 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
TCRBV9S1A1TA0A576 AC091799.1-201ENST00000422823 811 ntBASIC20.46■□□□□ 0.87
TCRBV9S1A1TA0A576 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC20.46■□□□□ 0.87
TCRBV9S1A1TA0A576 AC005837.3-201ENST00000612163 286 ntBASIC20.46■□□□□ 0.87
TCRBV9S1A1TA0A576 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
TCRBV9S1A1TA0A576 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
TCRBV9S1A1TA0A576 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
TCRBV9S1A1TA0A576 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
TCRBV9S1A1TA0A576 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC20.46■□□□□ 0.87
TCRBV9S1A1TA0A576 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
TCRBV9S1A1TA0A576 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
TCRBV9S1A1TA0A576 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
TCRBV9S1A1TA0A576 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
TCRBV9S1A1TA0A576 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC20.45■□□□□ 0.87
TCRBV9S1A1TA0A576 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
TCRBV9S1A1TA0A576 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC20.45■□□□□ 0.86
TCRBV9S1A1TA0A576 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC20.45■□□□□ 0.86
TCRBV9S1A1TA0A576 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC20.45■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 51.3 ms