Protein–RNA interactions for Protein: A0A0J9YWB2

TRBV7-9, T-cell receptor beta variable 7-9 (Fragment), humanhuman

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV7-9A0A0J9YWB2 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC15.2■□□□□ 0.02
TRBV7-9A0A0J9YWB2 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC15.19■□□□□ 0.02
TRBV7-9A0A0J9YWB2 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
TRBV7-9A0A0J9YWB2 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
TRBV7-9A0A0J9YWB2 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
TRBV7-9A0A0J9YWB2 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
TRBV7-9A0A0J9YWB2 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
TRBV7-9A0A0J9YWB2 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
TRBV7-9A0A0J9YWB2 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC15.19■□□□□ 0.02
TRBV7-9A0A0J9YWB2 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
TRBV7-9A0A0J9YWB2 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
TRBV7-9A0A0J9YWB2 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC15.19■□□□□ 0.02
TRBV7-9A0A0J9YWB2 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
TRBV7-9A0A0J9YWB2 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
TRBV7-9A0A0J9YWB2 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
TRBV7-9A0A0J9YWB2 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC15.19■□□□□ 0.02
TRBV7-9A0A0J9YWB2 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
TRBV7-9A0A0J9YWB2 AC142381.2-201ENST00000566120 298 ntBASIC15.19■□□□□ 0.02
TRBV7-9A0A0J9YWB2 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC15.19■□□□□ 0.02
TRBV7-9A0A0J9YWB2 CCDC92B-201ENST00000575506 885 ntBASIC15.19■□□□□ 0.02
TRBV7-9A0A0J9YWB2 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC15.19■□□□□ 0.02
TRBV7-9A0A0J9YWB2 AC243732.1-201ENST00000612648 864 ntBASIC15.19■□□□□ 0.02
TRBV7-9A0A0J9YWB2 MIR2861-201ENST00000636310 90 ntBASIC15.19■□□□□ 0.02
TRBV7-9A0A0J9YWB2 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC15.19■□□□□ 0.02
TRBV7-9A0A0J9YWB2 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
TRBV7-9A0A0J9YWB2 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
TRBV7-9A0A0J9YWB2 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
TRBV7-9A0A0J9YWB2 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
TRBV7-9A0A0J9YWB2 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
TRBV7-9A0A0J9YWB2 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
TRBV7-9A0A0J9YWB2 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
TRBV7-9A0A0J9YWB2 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC15.19■□□□□ 0.02
TRBV7-9A0A0J9YWB2 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
TRBV7-9A0A0J9YWB2 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
TRBV7-9A0A0J9YWB2 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
TRBV7-9A0A0J9YWB2 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
TRBV7-9A0A0J9YWB2 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC15.18■□□□□ 0.02
TRBV7-9A0A0J9YWB2 AK1-201ENST00000223836 736 ntTSL 3 BASIC15.18■□□□□ 0.02
TRBV7-9A0A0J9YWB2 PTPA-214ENST00000423100 988 ntTSL 2 BASIC15.18■□□□□ 0.02
TRBV7-9A0A0J9YWB2 SLC7A5P1-201ENST00000568957 537 ntBASIC15.18■□□□□ 0.02
TRBV7-9A0A0J9YWB2 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC15.18■□□□□ 0.02
TRBV7-9A0A0J9YWB2 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
TRBV7-9A0A0J9YWB2 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
TRBV7-9A0A0J9YWB2 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC15.18■□□□□ 0.02
TRBV7-9A0A0J9YWB2 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
TRBV7-9A0A0J9YWB2 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
TRBV7-9A0A0J9YWB2 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC15.18■□□□□ 0.02
TRBV7-9A0A0J9YWB2 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
TRBV7-9A0A0J9YWB2 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
TRBV7-9A0A0J9YWB2 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
TRBV7-9A0A0J9YWB2 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC15.18■□□□□ 0.02
TRBV7-9A0A0J9YWB2 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC15.18■□□□□ 0.02
TRBV7-9A0A0J9YWB2 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC15.18■□□□□ 0.02
TRBV7-9A0A0J9YWB2 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
TRBV7-9A0A0J9YWB2 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC15.17■□□□□ 0.02
TRBV7-9A0A0J9YWB2 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
TRBV7-9A0A0J9YWB2 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
TRBV7-9A0A0J9YWB2 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TRBV7-9A0A0J9YWB2 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TRBV7-9A0A0J9YWB2 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
TRBV7-9A0A0J9YWB2 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC15.17■□□□□ 0.02
TRBV7-9A0A0J9YWB2 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
TRBV7-9A0A0J9YWB2 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TRBV7-9A0A0J9YWB2 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
TRBV7-9A0A0J9YWB2 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
TRBV7-9A0A0J9YWB2 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
TRBV7-9A0A0J9YWB2 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
TRBV7-9A0A0J9YWB2 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
TRBV7-9A0A0J9YWB2 AC123595.1-201ENST00000440769 1046 ntBASIC15.17■□□□□ 0.02
TRBV7-9A0A0J9YWB2 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC15.17■□□□□ 0.02
TRBV7-9A0A0J9YWB2 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
TRBV7-9A0A0J9YWB2 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC15.17■□□□□ 0.02
TRBV7-9A0A0J9YWB2 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
TRBV7-9A0A0J9YWB2 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC15.17■□□□□ 0.02
TRBV7-9A0A0J9YWB2 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TRBV7-9A0A0J9YWB2 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC15.17■□□□□ 0.02
TRBV7-9A0A0J9YWB2 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC15.17■□□□□ 0.02
TRBV7-9A0A0J9YWB2 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
TRBV7-9A0A0J9YWB2 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
TRBV7-9A0A0J9YWB2 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TRBV7-9A0A0J9YWB2 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
TRBV7-9A0A0J9YWB2 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC15.17■□□□□ 0.02
TRBV7-9A0A0J9YWB2 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TRBV7-9A0A0J9YWB2 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
TRBV7-9A0A0J9YWB2 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TRBV7-9A0A0J9YWB2 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TRBV7-9A0A0J9YWB2 USP39-204ENST00000409766 2033 ntTSL 2 BASIC15.16■□□□□ 0.02
TRBV7-9A0A0J9YWB2 AL512408.1-201ENST00000569378 2000 ntBASIC15.16■□□□□ 0.02
TRBV7-9A0A0J9YWB2 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC15.16■□□□□ 0.02
TRBV7-9A0A0J9YWB2 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
TRBV7-9A0A0J9YWB2 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC15.16■□□□□ 0.02
TRBV7-9A0A0J9YWB2 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC15.16■□□□□ 0.02
TRBV7-9A0A0J9YWB2 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
TRBV7-9A0A0J9YWB2 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TRBV7-9A0A0J9YWB2 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC15.16■□□□□ 0.02
TRBV7-9A0A0J9YWB2 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TRBV7-9A0A0J9YWB2 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TRBV7-9A0A0J9YWB2 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
TRBV7-9A0A0J9YWB2 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TRBV7-9A0A0J9YWB2 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 23.1 ms