Protein–RNA interactions for Protein: A0A0D9SF12

CCDC163, Coiled-coil domain-containing 163, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC163A0A0D9SF12 Six3os1_6.1-201ENST00000620790 196 ntBASIC20.29■□□□□ 0.84
CCDC163A0A0D9SF12 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC20.29■□□□□ 0.84
CCDC163A0A0D9SF12 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC20.29■□□□□ 0.84
CCDC163A0A0D9SF12 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC20.29■□□□□ 0.84
CCDC163A0A0D9SF12 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CCDC163A0A0D9SF12 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
CCDC163A0A0D9SF12 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
CCDC163A0A0D9SF12 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC20.28■□□□□ 0.84
CCDC163A0A0D9SF12 ARMC10P1-201ENST00000313754 855 ntBASIC20.28■□□□□ 0.84
CCDC163A0A0D9SF12 TREX2-204ENST00000370212 861 ntTSL 5 BASIC20.28■□□□□ 0.84
CCDC163A0A0D9SF12 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
CCDC163A0A0D9SF12 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
CCDC163A0A0D9SF12 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC20.28■□□□□ 0.84
CCDC163A0A0D9SF12 TPM1-226ENST00000560959 925 ntTSL 2 BASIC20.28■□□□□ 0.84
CCDC163A0A0D9SF12 AL049597.2-201ENST00000565575 961 ntBASIC20.28■□□□□ 0.84
CCDC163A0A0D9SF12 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC20.28■□□□□ 0.84
CCDC163A0A0D9SF12 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC20.28■□□□□ 0.84
CCDC163A0A0D9SF12 DECR2-212ENST00000627716 352 ntTSL 2 BASIC20.28■□□□□ 0.84
CCDC163A0A0D9SF12 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC20.28■□□□□ 0.84
CCDC163A0A0D9SF12 GLDC-219ENST00000640208 420 ntTSL 2 BASIC20.28■□□□□ 0.84
CCDC163A0A0D9SF12 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CCDC163A0A0D9SF12 NBPF21P-201ENST00000425093 1451 ntBASIC20.28■□□□□ 0.84
CCDC163A0A0D9SF12 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CCDC163A0A0D9SF12 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
CCDC163A0A0D9SF12 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
CCDC163A0A0D9SF12 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC20.27■□□□□ 0.84
CCDC163A0A0D9SF12 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC20.27■□□□□ 0.84
CCDC163A0A0D9SF12 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CCDC163A0A0D9SF12 EXOC3-AS1-202ENST00000623673 1663 ntBASIC20.27■□□□□ 0.84
CCDC163A0A0D9SF12 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CCDC163A0A0D9SF12 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CCDC163A0A0D9SF12 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
CCDC163A0A0D9SF12 P4HB-223ENST00000576390 439 ntTSL 4 BASIC20.27■□□□□ 0.84
CCDC163A0A0D9SF12 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
CCDC163A0A0D9SF12 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC20.27■□□□□ 0.84
CCDC163A0A0D9SF12 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
CCDC163A0A0D9SF12 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.83
CCDC163A0A0D9SF12 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.83
CCDC163A0A0D9SF12 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
CCDC163A0A0D9SF12 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC20.26■□□□□ 0.83
CCDC163A0A0D9SF12 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CCDC163A0A0D9SF12 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC20.26■□□□□ 0.83
CCDC163A0A0D9SF12 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
CCDC163A0A0D9SF12 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
CCDC163A0A0D9SF12 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CCDC163A0A0D9SF12 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
CCDC163A0A0D9SF12 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC20.26■□□□□ 0.83
CCDC163A0A0D9SF12 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CCDC163A0A0D9SF12 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC20.26■□□□□ 0.83
CCDC163A0A0D9SF12 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
CCDC163A0A0D9SF12 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
CCDC163A0A0D9SF12 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
CCDC163A0A0D9SF12 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CCDC163A0A0D9SF12 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC20.25■□□□□ 0.83
CCDC163A0A0D9SF12 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CCDC163A0A0D9SF12 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CCDC163A0A0D9SF12 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CCDC163A0A0D9SF12 UNC93B2-201ENST00000285383 730 ntBASIC20.25■□□□□ 0.83
CCDC163A0A0D9SF12 FAM197Y1-201ENST00000421178 764 ntBASIC20.25■□□□□ 0.83
CCDC163A0A0D9SF12 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC20.25■□□□□ 0.83
CCDC163A0A0D9SF12 NUDT16P1-203ENST00000513809 620 ntBASIC20.25■□□□□ 0.83
CCDC163A0A0D9SF12 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC20.25■□□□□ 0.83
CCDC163A0A0D9SF12 RMI2-205ENST00000576027 818 ntTSL 2 BASIC20.25■□□□□ 0.83
CCDC163A0A0D9SF12 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC20.25■□□□□ 0.83
CCDC163A0A0D9SF12 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC20.25■□□□□ 0.83
CCDC163A0A0D9SF12 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
CCDC163A0A0D9SF12 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CCDC163A0A0D9SF12 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CCDC163A0A0D9SF12 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CCDC163A0A0D9SF12 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
CCDC163A0A0D9SF12 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
CCDC163A0A0D9SF12 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
CCDC163A0A0D9SF12 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
CCDC163A0A0D9SF12 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC20.24■□□□□ 0.83
CCDC163A0A0D9SF12 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC20.24■□□□□ 0.83
CCDC163A0A0D9SF12 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CCDC163A0A0D9SF12 RBM17P1-201ENST00000453646 1190 ntBASIC20.24■□□□□ 0.83
CCDC163A0A0D9SF12 FDX2-207ENST00000494368 584 ntTSL 4 BASIC20.24■□□□□ 0.83
CCDC163A0A0D9SF12 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC20.24■□□□□ 0.83
CCDC163A0A0D9SF12 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC20.24■□□□□ 0.83
CCDC163A0A0D9SF12 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC20.24■□□□□ 0.83
CCDC163A0A0D9SF12 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
CCDC163A0A0D9SF12 AC004264.1-201ENST00000608354 794 ntBASIC20.24■□□□□ 0.83
CCDC163A0A0D9SF12 MIR6786-201ENST00000616843 113 ntBASIC20.24■□□□□ 0.83
CCDC163A0A0D9SF12 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
CCDC163A0A0D9SF12 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC20.24■□□□□ 0.83
CCDC163A0A0D9SF12 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC20.24■□□□□ 0.83
CCDC163A0A0D9SF12 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CCDC163A0A0D9SF12 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
CCDC163A0A0D9SF12 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
CCDC163A0A0D9SF12 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC20.24■□□□□ 0.83
CCDC163A0A0D9SF12 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC20.24■□□□□ 0.83
CCDC163A0A0D9SF12 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC20.24■□□□□ 0.83
CCDC163A0A0D9SF12 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CCDC163A0A0D9SF12 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC20.23■□□□□ 0.83
CCDC163A0A0D9SF12 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CCDC163A0A0D9SF12 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CCDC163A0A0D9SF12 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
CCDC163A0A0D9SF12 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC20.23■□□□□ 0.83
CCDC163A0A0D9SF12 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC20.23■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 18.2 ms