Protein–RNA interactions for Protein: A0A0B4J266

TRAV41, T-cell receptor alpha variable 41 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV41A0A0B4J266 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TRAV41A0A0B4J266 AIRN-201ENST00000601203 4374 ntBASIC16.04■□□□□ 0.16
TRAV41A0A0B4J266 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
TRAV41A0A0B4J266 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC16.04■□□□□ 0.16
TRAV41A0A0B4J266 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC16.03■□□□□ 0.16
TRAV41A0A0B4J266 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
TRAV41A0A0B4J266 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC16.03■□□□□ 0.16
TRAV41A0A0B4J266 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TRAV41A0A0B4J266 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
TRAV41A0A0B4J266 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC16.03■□□□□ 0.16
TRAV41A0A0B4J266 GCK-205ENST00000437084 1385 ntTSL 5 BASIC16.03■□□□□ 0.16
TRAV41A0A0B4J266 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
TRAV41A0A0B4J266 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
TRAV41A0A0B4J266 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC16.03■□□□□ 0.16
TRAV41A0A0B4J266 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TRAV41A0A0B4J266 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TRAV41A0A0B4J266 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
TRAV41A0A0B4J266 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TRAV41A0A0B4J266 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TRAV41A0A0B4J266 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC16.03■□□□□ 0.16
TRAV41A0A0B4J266 MIPEPP3-201ENST00000412105 444 ntBASIC16.03■□□□□ 0.16
TRAV41A0A0B4J266 GUSBP6-202ENST00000438529 1198 ntBASIC16.03■□□□□ 0.16
TRAV41A0A0B4J266 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
TRAV41A0A0B4J266 MARS-234ENST00000630571 216 ntTSL 5 BASIC16.03■□□□□ 0.16
TRAV41A0A0B4J266 MARS-235ENST00000630803 183 ntTSL 3 BASIC16.03■□□□□ 0.16
TRAV41A0A0B4J266 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TRAV41A0A0B4J266 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
TRAV41A0A0B4J266 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TRAV41A0A0B4J266 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC16.03■□□□□ 0.16
TRAV41A0A0B4J266 AC007225.1-201ENST00000566331 1836 ntBASIC16.03■□□□□ 0.16
TRAV41A0A0B4J266 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
TRAV41A0A0B4J266 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
TRAV41A0A0B4J266 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
TRAV41A0A0B4J266 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
TRAV41A0A0B4J266 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
TRAV41A0A0B4J266 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC16.02■□□□□ 0.16
TRAV41A0A0B4J266 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
TRAV41A0A0B4J266 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC16.02■□□□□ 0.16
TRAV41A0A0B4J266 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
TRAV41A0A0B4J266 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
TRAV41A0A0B4J266 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
TRAV41A0A0B4J266 SERPINH1P1-201ENST00000419794 1249 ntBASIC16.02■□□□□ 0.16
TRAV41A0A0B4J266 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC16.02■□□□□ 0.16
TRAV41A0A0B4J266 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC16.02■□□□□ 0.16
TRAV41A0A0B4J266 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC16.02■□□□□ 0.16
TRAV41A0A0B4J266 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC16.02■□□□□ 0.16
TRAV41A0A0B4J266 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC16.02■□□□□ 0.16
TRAV41A0A0B4J266 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC16.02■□□□□ 0.16
TRAV41A0A0B4J266 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
TRAV41A0A0B4J266 AC105020.6-201ENST00000621523 1217 ntBASIC16.02■□□□□ 0.16
TRAV41A0A0B4J266 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC16.02■□□□□ 0.16
TRAV41A0A0B4J266 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC16.02■□□□□ 0.15
TRAV41A0A0B4J266 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
TRAV41A0A0B4J266 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.15
TRAV41A0A0B4J266 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
TRAV41A0A0B4J266 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.15
TRAV41A0A0B4J266 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC16.02■□□□□ 0.15
TRAV41A0A0B4J266 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
TRAV41A0A0B4J266 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
TRAV41A0A0B4J266 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC16.02■□□□□ 0.15
TRAV41A0A0B4J266 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
TRAV41A0A0B4J266 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.15
TRAV41A0A0B4J266 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
TRAV41A0A0B4J266 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
TRAV41A0A0B4J266 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC16.01■□□□□ 0.15
TRAV41A0A0B4J266 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC16.01■□□□□ 0.15
TRAV41A0A0B4J266 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
TRAV41A0A0B4J266 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
TRAV41A0A0B4J266 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
TRAV41A0A0B4J266 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC16.01■□□□□ 0.15
TRAV41A0A0B4J266 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
TRAV41A0A0B4J266 HES2-205ENST00000487437 968 ntTSL 3 BASIC16.01■□□□□ 0.15
TRAV41A0A0B4J266 MIR4758-201ENST00000577688 71 ntBASIC16.01■□□□□ 0.15
TRAV41A0A0B4J266 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC16.01■□□□□ 0.15
TRAV41A0A0B4J266 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC16.01■□□□□ 0.15
TRAV41A0A0B4J266 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC16.01■□□□□ 0.15
TRAV41A0A0B4J266 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
TRAV41A0A0B4J266 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
TRAV41A0A0B4J266 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC16.01■□□□□ 0.15
TRAV41A0A0B4J266 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
TRAV41A0A0B4J266 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC16■□□□□ 0.15
TRAV41A0A0B4J266 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
TRAV41A0A0B4J266 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC16■□□□□ 0.15
TRAV41A0A0B4J266 KRT17P1-201ENST00000399211 1546 ntBASIC16■□□□□ 0.15
TRAV41A0A0B4J266 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC16■□□□□ 0.15
TRAV41A0A0B4J266 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
TRAV41A0A0B4J266 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
TRAV41A0A0B4J266 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
TRAV41A0A0B4J266 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC16■□□□□ 0.15
TRAV41A0A0B4J266 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC16■□□□□ 0.15
TRAV41A0A0B4J266 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC16■□□□□ 0.15
TRAV41A0A0B4J266 AL355802.2-201ENST00000402069 882 ntBASIC16■□□□□ 0.15
TRAV41A0A0B4J266 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
TRAV41A0A0B4J266 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC16■□□□□ 0.15
TRAV41A0A0B4J266 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC16■□□□□ 0.15
TRAV41A0A0B4J266 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC16■□□□□ 0.15
TRAV41A0A0B4J266 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC16■□□□□ 0.15
TRAV41A0A0B4J266 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
TRAV41A0A0B4J266 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC16■□□□□ 0.15
TRAV41A0A0B4J266 AC092118.2-201ENST00000613495 667 ntBASIC16■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 30.9 ms