Protein–RNA interactions for Protein: A0A0B4J249

TRAV5, T-cell receptor alpha variable 5 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV5A0A0B4J249 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TRAV5A0A0B4J249 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
TRAV5A0A0B4J249 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC15.8■□□□□ 0.12
TRAV5A0A0B4J249 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC15.8■□□□□ 0.12
TRAV5A0A0B4J249 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC15.8■□□□□ 0.12
TRAV5A0A0B4J249 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC15.8■□□□□ 0.12
TRAV5A0A0B4J249 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
TRAV5A0A0B4J249 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
TRAV5A0A0B4J249 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
TRAV5A0A0B4J249 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC15.8■□□□□ 0.12
TRAV5A0A0B4J249 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
TRAV5A0A0B4J249 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TRAV5A0A0B4J249 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
TRAV5A0A0B4J249 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TRAV5A0A0B4J249 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TRAV5A0A0B4J249 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
TRAV5A0A0B4J249 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TRAV5A0A0B4J249 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TRAV5A0A0B4J249 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
TRAV5A0A0B4J249 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
TRAV5A0A0B4J249 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC15.79■□□□□ 0.12
TRAV5A0A0B4J249 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TRAV5A0A0B4J249 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC15.79■□□□□ 0.12
TRAV5A0A0B4J249 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TRAV5A0A0B4J249 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TRAV5A0A0B4J249 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TRAV5A0A0B4J249 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC15.79■□□□□ 0.12
TRAV5A0A0B4J249 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TRAV5A0A0B4J249 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
TRAV5A0A0B4J249 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC15.79■□□□□ 0.12
TRAV5A0A0B4J249 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC15.79■□□□□ 0.12
TRAV5A0A0B4J249 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC15.79■□□□□ 0.12
TRAV5A0A0B4J249 MPST-208ENST00000628507 698 ntTSL 5 BASIC15.79■□□□□ 0.12
TRAV5A0A0B4J249 AL158211.5-201ENST00000623583 2518 ntBASIC15.79■□□□□ 0.12
TRAV5A0A0B4J249 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
TRAV5A0A0B4J249 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC15.79■□□□□ 0.12
TRAV5A0A0B4J249 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
TRAV5A0A0B4J249 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
TRAV5A0A0B4J249 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
TRAV5A0A0B4J249 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
TRAV5A0A0B4J249 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
TRAV5A0A0B4J249 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
TRAV5A0A0B4J249 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
TRAV5A0A0B4J249 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
TRAV5A0A0B4J249 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC15.79■□□□□ 0.12
TRAV5A0A0B4J249 AC125437.2-201ENST00000625180 2167 ntBASIC15.79■□□□□ 0.12
TRAV5A0A0B4J249 MFF-207ENST00000409565 1548 ntTSL 2 BASIC15.78■□□□□ 0.12
TRAV5A0A0B4J249 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC15.78■□□□□ 0.12
TRAV5A0A0B4J249 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC15.78■□□□□ 0.12
TRAV5A0A0B4J249 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
TRAV5A0A0B4J249 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
TRAV5A0A0B4J249 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
TRAV5A0A0B4J249 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
TRAV5A0A0B4J249 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
TRAV5A0A0B4J249 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
TRAV5A0A0B4J249 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC15.78■□□□□ 0.12
TRAV5A0A0B4J249 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
TRAV5A0A0B4J249 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC15.78■□□□□ 0.12
TRAV5A0A0B4J249 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC15.78■□□□□ 0.12
TRAV5A0A0B4J249 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC15.78■□□□□ 0.12
TRAV5A0A0B4J249 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC15.78■□□□□ 0.12
TRAV5A0A0B4J249 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
TRAV5A0A0B4J249 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
TRAV5A0A0B4J249 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC15.78■□□□□ 0.12
TRAV5A0A0B4J249 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC15.78■□□□□ 0.12
TRAV5A0A0B4J249 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC15.78■□□□□ 0.12
TRAV5A0A0B4J249 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC15.78■□□□□ 0.12
TRAV5A0A0B4J249 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
TRAV5A0A0B4J249 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
TRAV5A0A0B4J249 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
TRAV5A0A0B4J249 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC15.77■□□□□ 0.12
TRAV5A0A0B4J249 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
TRAV5A0A0B4J249 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC15.77■□□□□ 0.12
TRAV5A0A0B4J249 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.12
TRAV5A0A0B4J249 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC15.77■□□□□ 0.12
TRAV5A0A0B4J249 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
TRAV5A0A0B4J249 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC15.77■□□□□ 0.12
TRAV5A0A0B4J249 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
TRAV5A0A0B4J249 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC15.77■□□□□ 0.12
TRAV5A0A0B4J249 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
TRAV5A0A0B4J249 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC15.77■□□□□ 0.12
TRAV5A0A0B4J249 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC15.77■□□□□ 0.12
TRAV5A0A0B4J249 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
TRAV5A0A0B4J249 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC15.77■□□□□ 0.12
TRAV5A0A0B4J249 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
TRAV5A0A0B4J249 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC15.77■□□□□ 0.12
TRAV5A0A0B4J249 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
TRAV5A0A0B4J249 MAG-206ENST00000597035 542 ntTSL 4 BASIC15.77■□□□□ 0.12
TRAV5A0A0B4J249 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC15.77■□□□□ 0.12
TRAV5A0A0B4J249 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC15.77■□□□□ 0.12
TRAV5A0A0B4J249 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
TRAV5A0A0B4J249 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC15.77■□□□□ 0.12
TRAV5A0A0B4J249 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
TRAV5A0A0B4J249 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC15.77■□□□□ 0.11
TRAV5A0A0B4J249 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC15.77■□□□□ 0.11
TRAV5A0A0B4J249 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC15.77■□□□□ 0.11
TRAV5A0A0B4J249 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
TRAV5A0A0B4J249 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
TRAV5A0A0B4J249 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
TRAV5A0A0B4J249 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC15.77■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 61.5 ms