Protein–RNA interactions for Protein: A0A096LP49

CCDC187, Coiled-coil domain-containing protein 187, humanhuman

Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC187A0A096LP49 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
CCDC187A0A096LP49 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
CCDC187A0A096LP49 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
CCDC187A0A096LP49 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CCDC187A0A096LP49 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC19.38■□□□□ 0.69
CCDC187A0A096LP49 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC19.38■□□□□ 0.69
CCDC187A0A096LP49 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
CCDC187A0A096LP49 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
CCDC187A0A096LP49 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC19.38■□□□□ 0.69
CCDC187A0A096LP49 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CCDC187A0A096LP49 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CCDC187A0A096LP49 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
CCDC187A0A096LP49 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC19.38■□□□□ 0.69
CCDC187A0A096LP49 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC19.38■□□□□ 0.69
CCDC187A0A096LP49 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CCDC187A0A096LP49 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC19.38■□□□□ 0.69
CCDC187A0A096LP49 AC133561.5-201ENST00000635547 218 ntBASIC19.38■□□□□ 0.69
CCDC187A0A096LP49 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
CCDC187A0A096LP49 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
CCDC187A0A096LP49 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
CCDC187A0A096LP49 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CCDC187A0A096LP49 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC19.37■□□□□ 0.69
CCDC187A0A096LP49 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
CCDC187A0A096LP49 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC19.37■□□□□ 0.69
CCDC187A0A096LP49 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CCDC187A0A096LP49 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CCDC187A0A096LP49 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CCDC187A0A096LP49 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
CCDC187A0A096LP49 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
CCDC187A0A096LP49 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
CCDC187A0A096LP49 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
CCDC187A0A096LP49 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC19.37■□□□□ 0.69
CCDC187A0A096LP49 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC19.37■□□□□ 0.69
CCDC187A0A096LP49 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC19.37■□□□□ 0.69
CCDC187A0A096LP49 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CCDC187A0A096LP49 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC19.37■□□□□ 0.69
CCDC187A0A096LP49 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
CCDC187A0A096LP49 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CCDC187A0A096LP49 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
CCDC187A0A096LP49 MFF-203ENST00000349901 1716 ntTSL 2 BASIC19.37■□□□□ 0.69
CCDC187A0A096LP49 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CCDC187A0A096LP49 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
CCDC187A0A096LP49 EXOC3-AS1-202ENST00000623673 1663 ntBASIC19.36■□□□□ 0.69
CCDC187A0A096LP49 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
CCDC187A0A096LP49 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
CCDC187A0A096LP49 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CCDC187A0A096LP49 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CCDC187A0A096LP49 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
CCDC187A0A096LP49 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC19.36■□□□□ 0.69
CCDC187A0A096LP49 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC19.36■□□□□ 0.69
CCDC187A0A096LP49 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CCDC187A0A096LP49 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC19.36■□□□□ 0.69
CCDC187A0A096LP49 AC087499.1-201ENST00000418141 1075 ntBASIC19.36■□□□□ 0.69
CCDC187A0A096LP49 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC19.36■□□□□ 0.69
CCDC187A0A096LP49 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC19.36■□□□□ 0.69
CCDC187A0A096LP49 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC19.36■□□□□ 0.69
CCDC187A0A096LP49 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC19.36■□□□□ 0.69
CCDC187A0A096LP49 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CCDC187A0A096LP49 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CCDC187A0A096LP49 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
CCDC187A0A096LP49 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CCDC187A0A096LP49 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC19.35■□□□□ 0.69
CCDC187A0A096LP49 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC19.35■□□□□ 0.69
CCDC187A0A096LP49 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CCDC187A0A096LP49 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CCDC187A0A096LP49 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC19.35■□□□□ 0.69
CCDC187A0A096LP49 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CCDC187A0A096LP49 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CCDC187A0A096LP49 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CCDC187A0A096LP49 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CCDC187A0A096LP49 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
CCDC187A0A096LP49 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
CCDC187A0A096LP49 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
CCDC187A0A096LP49 PENK-204ENST00000518770 863 ntTSL 2 BASIC19.35■□□□□ 0.69
CCDC187A0A096LP49 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC19.35■□□□□ 0.69
CCDC187A0A096LP49 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC19.35■□□□□ 0.69
CCDC187A0A096LP49 SNX21-213ENST00000614929 587 ntTSL 5 BASIC19.35■□□□□ 0.69
CCDC187A0A096LP49 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC19.35■□□□□ 0.69
CCDC187A0A096LP49 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC19.35■□□□□ 0.69
CCDC187A0A096LP49 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CCDC187A0A096LP49 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
CCDC187A0A096LP49 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC19.35■□□□□ 0.69
CCDC187A0A096LP49 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC19.35■□□□□ 0.69
CCDC187A0A096LP49 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
CCDC187A0A096LP49 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CCDC187A0A096LP49 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CCDC187A0A096LP49 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
CCDC187A0A096LP49 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
CCDC187A0A096LP49 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC19.34■□□□□ 0.69
CCDC187A0A096LP49 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
CCDC187A0A096LP49 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC19.34■□□□□ 0.69
CCDC187A0A096LP49 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC19.34■□□□□ 0.69
CCDC187A0A096LP49 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC19.34■□□□□ 0.69
CCDC187A0A096LP49 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
CCDC187A0A096LP49 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC19.34■□□□□ 0.69
CCDC187A0A096LP49 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
CCDC187A0A096LP49 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC19.34■□□□□ 0.69
CCDC187A0A096LP49 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CCDC187A0A096LP49 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CCDC187A0A096LP49 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 26.6 ms