Protein–RNA interactions for Protein: A0A075B6U4

TRAV7, T-cell receptor alpha variable 7 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV7A0A075B6U4 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.47
TRAV7A0A075B6U4 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC12.08□□□□□ -0.47
TRAV7A0A075B6U4 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
TRAV7A0A075B6U4 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
TRAV7A0A075B6U4 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC12.08□□□□□ -0.48
TRAV7A0A075B6U4 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
TRAV7A0A075B6U4 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
TRAV7A0A075B6U4 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC12.08□□□□□ -0.48
TRAV7A0A075B6U4 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC12.08□□□□□ -0.48
TRAV7A0A075B6U4 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
TRAV7A0A075B6U4 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC12.08□□□□□ -0.48
TRAV7A0A075B6U4 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
TRAV7A0A075B6U4 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC12.08□□□□□ -0.48
TRAV7A0A075B6U4 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
TRAV7A0A075B6U4 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
TRAV7A0A075B6U4 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
TRAV7A0A075B6U4 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
TRAV7A0A075B6U4 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
TRAV7A0A075B6U4 PCBD2-201ENST00000254908 1223 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
TRAV7A0A075B6U4 RPS2-209ENST00000529806 993 ntTSL 3 BASIC12.08□□□□□ -0.48
TRAV7A0A075B6U4 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
TRAV7A0A075B6U4 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
TRAV7A0A075B6U4 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC12.08□□□□□ -0.48
TRAV7A0A075B6U4 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
TRAV7A0A075B6U4 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
TRAV7A0A075B6U4 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
TRAV7A0A075B6U4 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
TRAV7A0A075B6U4 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC12.08□□□□□ -0.48
TRAV7A0A075B6U4 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
TRAV7A0A075B6U4 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC12.08□□□□□ -0.48
TRAV7A0A075B6U4 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
TRAV7A0A075B6U4 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
TRAV7A0A075B6U4 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC12.08□□□□□ -0.48
TRAV7A0A075B6U4 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC12.08□□□□□ -0.48
TRAV7A0A075B6U4 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC12.08□□□□□ -0.48
TRAV7A0A075B6U4 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
TRAV7A0A075B6U4 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
TRAV7A0A075B6U4 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC12.08□□□□□ -0.48
TRAV7A0A075B6U4 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC12.08□□□□□ -0.48
TRAV7A0A075B6U4 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
TRAV7A0A075B6U4 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
TRAV7A0A075B6U4 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
TRAV7A0A075B6U4 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
TRAV7A0A075B6U4 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
TRAV7A0A075B6U4 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
TRAV7A0A075B6U4 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
TRAV7A0A075B6U4 PLK5-205ENST00000642079 1969 ntBASIC12.07□□□□□ -0.48
TRAV7A0A075B6U4 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
TRAV7A0A075B6U4 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC12.07□□□□□ -0.48
TRAV7A0A075B6U4 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
TRAV7A0A075B6U4 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC12.07□□□□□ -0.48
TRAV7A0A075B6U4 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
TRAV7A0A075B6U4 AC099398.1-201ENST00000567919 2776 ntBASIC12.07□□□□□ -0.48
TRAV7A0A075B6U4 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
TRAV7A0A075B6U4 AC104581.1-202ENST00000635932 2618 ntBASIC12.07□□□□□ -0.48
TRAV7A0A075B6U4 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
TRAV7A0A075B6U4 AC135050.7-201ENST00000624508 2218 ntBASIC12.07□□□□□ -0.48
TRAV7A0A075B6U4 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
TRAV7A0A075B6U4 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC12.07□□□□□ -0.48
TRAV7A0A075B6U4 TCF3P1-201ENST00000423021 1937 ntBASIC12.07□□□□□ -0.48
TRAV7A0A075B6U4 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC12.07□□□□□ -0.48
TRAV7A0A075B6U4 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
TRAV7A0A075B6U4 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
TRAV7A0A075B6U4 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
TRAV7A0A075B6U4 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
TRAV7A0A075B6U4 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
TRAV7A0A075B6U4 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
TRAV7A0A075B6U4 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
TRAV7A0A075B6U4 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC12.07□□□□□ -0.48
TRAV7A0A075B6U4 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC12.06□□□□□ -0.48
TRAV7A0A075B6U4 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
TRAV7A0A075B6U4 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC12.06□□□□□ -0.48
TRAV7A0A075B6U4 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
TRAV7A0A075B6U4 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
TRAV7A0A075B6U4 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
TRAV7A0A075B6U4 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
TRAV7A0A075B6U4 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
TRAV7A0A075B6U4 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
TRAV7A0A075B6U4 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
TRAV7A0A075B6U4 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
TRAV7A0A075B6U4 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC12.06□□□□□ -0.48
TRAV7A0A075B6U4 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
TRAV7A0A075B6U4 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
TRAV7A0A075B6U4 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC12.06□□□□□ -0.48
TRAV7A0A075B6U4 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC12.06□□□□□ -0.48
TRAV7A0A075B6U4 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
TRAV7A0A075B6U4 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC12.06□□□□□ -0.48
TRAV7A0A075B6U4 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC12.06□□□□□ -0.48
TRAV7A0A075B6U4 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC12.06□□□□□ -0.48
TRAV7A0A075B6U4 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC12.06□□□□□ -0.48
TRAV7A0A075B6U4 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC12.06□□□□□ -0.48
TRAV7A0A075B6U4 NFIC-211ENST00000641145 8399 ntBASIC12.06□□□□□ -0.48
TRAV7A0A075B6U4 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
TRAV7A0A075B6U4 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
TRAV7A0A075B6U4 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
TRAV7A0A075B6U4 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC12.06□□□□□ -0.48
TRAV7A0A075B6U4 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
TRAV7A0A075B6U4 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
TRAV7A0A075B6U4 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
TRAV7A0A075B6U4 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC12.06□□□□□ -0.48
Retrieved 100 of 98,524 protein–RNA pairs in 35.5 ms