Protein–RNA interactions for Protein: P43005

SLC1A1, Excitatory amino acid transporter 3, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A1P43005 DPY19L3-205ENST00000586987 5925 ntTSL 5 BASIC9□□□□□ -0.97
SLC1A1P43005 LRRC37A6P-202ENST00000448648 5444 ntBASIC9□□□□□ -0.97
SLC1A1P43005 CXorf57-201ENST00000372544 3607 ntTSL 2 BASIC9□□□□□ -0.97
SLC1A1P43005 CAPNS1P1-201ENST00000401029 633 ntBASIC9□□□□□ -0.97
SLC1A1P43005 GLRX3P2-201ENST00000405027 1038 ntBASIC9□□□□□ -0.97
SLC1A1P43005 AL122008.2-201ENST00000412915 570 ntBASIC9□□□□□ -0.97
SLC1A1P43005 AL513302.1-201ENST00000415679 428 ntBASIC9□□□□□ -0.97
SLC1A1P43005 AC103563.8-201ENST00000415716 318 ntBASIC9□□□□□ -0.97
SLC1A1P43005 AC011999.1-201ENST00000424794 1024 ntBASIC9□□□□□ -0.97
SLC1A1P43005 PIGCP2-201ENST00000433617 835 ntBASIC9□□□□□ -0.97
SLC1A1P43005 LINC00545-201ENST00000440633 411 ntTSL 2 BASIC9□□□□□ -0.97
SLC1A1P43005 MICC-201ENST00000445710 1055 ntBASIC9□□□□□ -0.97
SLC1A1P43005 AL355537.1-201ENST00000446589 450 ntTSL 2 BASIC9□□□□□ -0.97
SLC1A1P43005 RPL18AP2-201ENST00000450007 482 ntBASIC9□□□□□ -0.97
SLC1A1P43005 AL353194.1-201ENST00000451507 441 ntTSL 2 BASIC9□□□□□ -0.97
SLC1A1P43005 HSD17B7P2-201ENST00000471365 1033 ntBASIC9□□□□□ -0.97
SLC1A1P43005 OR9A3P-202ENST00000485185 878 ntBASIC9□□□□□ -0.97
SLC1A1P43005 AP005435.2-201ENST00000525489 590 ntBASIC9□□□□□ -0.97
SLC1A1P43005 AC090625.2-201ENST00000534165 518 ntTSL 3 BASIC9□□□□□ -0.97
SLC1A1P43005 AC243972.2-201ENST00000541653 991 ntBASIC9□□□□□ -0.97
SLC1A1P43005 AC073651.1-201ENST00000544015 465 ntTSL 3 BASIC9□□□□□ -0.97
SLC1A1P43005 NACA-204ENST00000546392 802 ntAPPRIS P1 TSL 2 BASIC9□□□□□ -0.97
SLC1A1P43005 AL110292.1-202ENST00000552303 568 ntTSL 4 BASIC9□□□□□ -0.97
SLC1A1P43005 AC012414.3-201ENST00000559621 748 ntTSL 5 BASIC9□□□□□ -0.97
SLC1A1P43005 MKRN2OS-203ENST00000564146 985 ntAPPRIS P1 TSL 5 BASIC9□□□□□ -0.97
SLC1A1P43005 AL137002.1-201ENST00000600642 182 ntBASIC9□□□□□ -0.97
SLC1A1P43005 AC078802.1-201ENST00000602879 843 ntTSL 4 BASIC9□□□□□ -0.97
SLC1A1P43005 uc_338.27-201ENST00000611385 169 ntBASIC9□□□□□ -0.97
SLC1A1P43005 MIR6880-201ENST00000622851 62 ntBASIC9□□□□□ -0.97
SLC1A1P43005 AC011840.6-201ENST00000624536 610 ntBASIC9□□□□□ -0.97
SLC1A1P43005 DARS2-201ENST00000361951 3506 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
SLC1A1P43005 AC019117.2-202ENST00000635900 1476 ntTSL 5 BASIC9□□□□□ -0.97
SLC1A1P43005 MASP1-205ENST00000392472 3900 ntTSL 1 (best) BASIC9□□□□□ -0.97
SLC1A1P43005 COPG1-201ENST00000314797 3078 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
SLC1A1P43005 IL24-204ENST00000391929 1320 ntAPPRIS ALT2 TSL 1 (best) BASIC9□□□□□ -0.97
SLC1A1P43005 PBLD-207ENST00000495025 1349 ntTSL 5 BASIC9□□□□□ -0.97
SLC1A1P43005 LINC01583-202ENST00000558082 2568 ntTSL 1 (best) BASIC9□□□□□ -0.97
SLC1A1P43005 LINC00672-201ENST00000583195 3692 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
SLC1A1P43005 PACRG-203ENST00000366889 1503 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
SLC1A1P43005 PAAF1-202ENST00000376384 1500 ntTSL 5 BASIC9□□□□□ -0.97
SLC1A1P43005 UBQLN3-201ENST00000311659 2407 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
SLC1A1P43005 SCAND2P-201ENST00000348993 8975 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
SLC1A1P43005 PARP4-201ENST00000381989 5474 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
SLC1A1P43005 HMGB4-203ENST00000519684 2343 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
SLC1A1P43005 KAT6A-203ENST00000406337 9241 ntAPPRIS P3 TSL 5 BASIC8.99□□□□□ -0.97
SLC1A1P43005 ZNF225-206ENST00000592780 2538 ntTSL 5 BASIC8.99□□□□□ -0.97
SLC1A1P43005 DNAH10-201ENST00000409039 14473 ntAPPRIS ALT2 TSL 5 BASIC8.99□□□□□ -0.97
SLC1A1P43005 VPS4B-201ENST00000238497 3324 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
SLC1A1P43005 CTNNA1-210ENST00000518825 3536 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
SLC1A1P43005 DLC1-201ENST00000276297 7447 ntAPPRIS P4 TSL 1 (best) BASIC8.99□□□□□ -0.97
SLC1A1P43005 TTC33-201ENST00000337702 2612 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
SLC1A1P43005 MPI-213ENST00000566377 2809 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
SLC1A1P43005 LTBP1-207ENST00000418533 5164 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
SLC1A1P43005 GDF3-201ENST00000329913 1239 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
SLC1A1P43005 SPRR3-202ENST00000331860 985 ntAPPRIS P2 TSL 3 BASIC8.99□□□□□ -0.97
SLC1A1P43005 GSTA5-202ENST00000370989 892 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
SLC1A1P43005 CFAP61-207ENST00000389656 776 ntAPPRIS ALT2 TSL 1 (best) BASIC8.99□□□□□ -0.97
SLC1A1P43005 IGLV1-51-201ENST00000390290 389 ntAPPRIS P1 BASIC8.99□□□□□ -0.97
SLC1A1P43005 FTH1P3-201ENST00000394290 584 ntBASIC8.99□□□□□ -0.97
SLC1A1P43005 ATG10-IT1-201ENST00000396880 487 ntBASIC8.99□□□□□ -0.97
SLC1A1P43005 RPS7-204ENST00000407445 833 ntTSL 2 BASIC8.99□□□□□ -0.97
SLC1A1P43005 AC073316.2-201ENST00000414126 418 ntTSL 2 BASIC8.99□□□□□ -0.97
SLC1A1P43005 AC021016.1-201ENST00000414167 498 ntBASIC8.99□□□□□ -0.97
SLC1A1P43005 RMDN2-AS1-201ENST00000414365 859 ntTSL 4 BASIC8.99□□□□□ -0.97
SLC1A1P43005 Z68871.1-201ENST00000426528 1133 ntTSL 5 BASIC8.99□□□□□ -0.97
SLC1A1P43005 AC004006.1-201ENST00000434994 377 ntBASIC8.99□□□□□ -0.97
SLC1A1P43005 PRSS37-203ENST00000438520 826 ntAPPRIS P1 TSL 5 BASIC8.99□□□□□ -0.97
SLC1A1P43005 PLCE1-AS2-204ENST00000438899 945 ntTSL 2 BASIC8.99□□□□□ -0.97
SLC1A1P43005 AL590609.1-201ENST00000442164 328 ntBASIC8.99□□□□□ -0.97
SLC1A1P43005 AC008069.1-201ENST00000444710 950 ntBASIC8.99□□□□□ -0.97
SLC1A1P43005 AC016700.3-201ENST00000455541 448 ntTSL 3 BASIC8.99□□□□□ -0.97
SLC1A1P43005 PAX8-AS1-208ENST00000456685 1207 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
SLC1A1P43005 RN7SL420P-201ENST00000463843 298 ntBASIC8.99□□□□□ -0.97
SLC1A1P43005 RN7SL7P-201ENST00000467823 298 ntBASIC8.99□□□□□ -0.97
SLC1A1P43005 AC020636.1-201ENST00000469268 565 ntTSL 4 BASIC8.99□□□□□ -0.97
SLC1A1P43005 AC004917.1-202ENST00000475791 760 ntTSL 3 BASIC8.99□□□□□ -0.97
SLC1A1P43005 FAM107B-228ENST00000496330 697 ntAPPRIS P1 TSL 4 BASIC8.99□□□□□ -0.97
SLC1A1P43005 ATOX1-202ENST00000520382 466 ntTSL 5 BASIC8.99□□□□□ -0.97
SLC1A1P43005 FLJ46284-203ENST00000521230 407 ntTSL 3 BASIC8.99□□□□□ -0.97
SLC1A1P43005 ANKRD42-206ENST00000528722 954 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
SLC1A1P43005 ZNF195-220ENST00000528796 881 ntTSL 5 BASIC8.99□□□□□ -0.97
SLC1A1P43005 LMO3-222ENST00000540445 906 ntTSL 2 BASIC8.99□□□□□ -0.97
SLC1A1P43005 AC034105.5-201ENST00000564017 314 ntBASIC8.99□□□□□ -0.97
SLC1A1P43005 RN7SL220P-201ENST00000581978 300 ntBASIC8.99□□□□□ -0.97
SLC1A1P43005 AC005379.1-201ENST00000585647 328 ntTSL 2 BASIC8.99□□□□□ -0.97
SLC1A1P43005 AC022966.2-201ENST00000587434 367 ntBASIC8.99□□□□□ -0.97
SLC1A1P43005 OR7D1P-201ENST00000592739 933 ntBASIC8.99□□□□□ -0.97
SLC1A1P43005 AURKC-206ENST00000598785 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC8.99□□□□□ -0.97
SLC1A1P43005 AP000962.1-201ENST00000602654 729 ntTSL 5 BASIC8.99□□□□□ -0.97
SLC1A1P43005 AC004840.2-201ENST00000603368 285 ntBASIC8.99□□□□□ -0.97
SLC1A1P43005 AC113554.1-201ENST00000606284 490 ntBASIC8.99□□□□□ -0.97
SLC1A1P43005 AC073254.1-206ENST00000617813 907 ntTSL 5 BASIC8.99□□□□□ -0.97
SLC1A1P43005 RHAG-203ENST00000618248 1203 ntTSL 5 BASIC8.99□□□□□ -0.97
SLC1A1P43005 CCL4L2-218ENST00000620576 652 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
SLC1A1P43005 AL136038.5-201ENST00000620835 554 ntBASIC8.99□□□□□ -0.97
SLC1A1P43005 CCDC163-207ENST00000629482 953 ntAPPRIS P5 TSL 1 (best) BASIC8.99□□□□□ -0.97
SLC1A1P43005 FAM205BP-202ENST00000399773 4009 ntBASIC8.99□□□□□ -0.97
SLC1A1P43005 AL031595.3-201ENST00000624919 14262 ntBASIC8.99□□□□□ -0.97
SLC1A1P43005 MRPS23-201ENST00000313608 5621 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
SLC1A1P43005 GOSR2-240ENST00000640621 3059 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
Retrieved 100 of 98,524 protein–RNA pairs in 59.1 ms