Protein–RNA interactions for Protein: Q96RF0

SNX18, Sorting nexin-18, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18Q96RF0 AC011416.3-201ENST00000603971 355 ntBASIC8.05□□□□□ -1.12
SNX18Q96RF0 AL662797.3-201ENST00000607476 773 ntBASIC8.05□□□□□ -1.12
SNX18Q96RF0 uc_338.30-201ENST00000612038 168 ntBASIC8.05□□□□□ -1.12
SNX18Q96RF0 AP001767.4-201ENST00000624584 452 ntBASIC8.05□□□□□ -1.12
SNX18Q96RF0 TEX51-209ENST00000636457 811 ntAPPRIS ALT2 TSL 5 BASIC8.05□□□□□ -1.12
SNX18Q96RF0 AL445648.1-201ENST00000641176 886 ntBASIC8.05□□□□□ -1.12
SNX18Q96RF0 SLFN12-206ENST00000452764 2423 ntAPPRIS P1 TSL 2 BASIC8.05□□□□□ -1.12
SNX18Q96RF0 CCDC65-201ENST00000266984 2084 ntTSL 5 BASIC8.05□□□□□ -1.12
SNX18Q96RF0 PPARGC1B-201ENST00000309241 10568 ntAPPRIS P3 TSL 1 (best) BASIC8.05□□□□□ -1.12
SNX18Q96RF0 LPA-202ENST00000447678 1839 ntTSL 5 BASIC8.05□□□□□ -1.12
SNX18Q96RF0 HNRNPU-219ENST00000639628 4546 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
SNX18Q96RF0 SH3D19-204ENST00000427414 2656 ntAPPRIS ALT1 TSL 1 (best) BASIC8.05□□□□□ -1.12
SNX18Q96RF0 OVGP1-201ENST00000369732 2243 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
SNX18Q96RF0 DLG2-202ENST00000330014 2789 ntTSL 2 BASIC8.05□□□□□ -1.12
SNX18Q96RF0 ANP32E-203ENST00000436748 1339 ntTSL 2 BASIC8.04□□□□□ -1.12
SNX18Q96RF0 NUP107-201ENST00000229179 6457 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
SNX18Q96RF0 LINC02072-201ENST00000441895 2645 ntTSL 2 BASIC8.04□□□□□ -1.12
SNX18Q96RF0 ANKRD20A21P-202ENST00000623715 3588 ntBASIC8.04□□□□□ -1.12
SNX18Q96RF0 AC009090.4-201ENST00000623921 3691 ntBASIC8.04□□□□□ -1.12
SNX18Q96RF0 KIF23-201ENST00000260363 3713 ntAPPRIS P4 TSL 1 (best) BASIC8.04□□□□□ -1.12
SNX18Q96RF0 USP40-203ENST00000427112 3744 ntAPPRIS ALT2 TSL 1 (best) BASIC8.04□□□□□ -1.12
SNX18Q96RF0 DECR1-201ENST00000220764 1207 ntAPPRIS P2 TSL 1 (best) BASIC8.04□□□□□ -1.12
SNX18Q96RF0 TAC1-201ENST00000319273 1239 ntAPPRIS P4 TSL 1 (best) BASIC8.04□□□□□ -1.12
SNX18Q96RF0 UBE2D3-202ENST00000338145 896 ntAPPRIS ALT1 TSL 5 BASIC8.04□□□□□ -1.12
SNX18Q96RF0 PFDN5-203ENST00000351500 478 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
SNX18Q96RF0 MIR30C1-201ENST00000385227 89 ntBASIC8.04□□□□□ -1.12
SNX18Q96RF0 DHRS9-203ENST00000421653 1044 ntTSL 5 BASIC8.04□□□□□ -1.12
SNX18Q96RF0 AL450384.2-201ENST00000425669 1028 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
SNX18Q96RF0 PMP22-204ENST00000426385 571 ntTSL 2 BASIC8.04□□□□□ -1.12
SNX18Q96RF0 HNRNPCP9-201ENST00000426952 859 ntBASIC8.04□□□□□ -1.12
SNX18Q96RF0 AC002076.1-201ENST00000435257 527 ntTSL 2 BASIC8.04□□□□□ -1.12
SNX18Q96RF0 MTPN-202ENST00000435723 879 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
SNX18Q96RF0 RPL10AP3-201ENST00000462503 651 ntBASIC8.04□□□□□ -1.12
SNX18Q96RF0 RN7SL754P-201ENST00000470784 266 ntBASIC8.04□□□□□ -1.12
SNX18Q96RF0 AC105265.1-201ENST00000479379 179 ntBASIC8.04□□□□□ -1.12
SNX18Q96RF0 LINC01438-201ENST00000512794 556 ntTSL 4 BASIC8.04□□□□□ -1.12
SNX18Q96RF0 AC022217.3-201ENST00000523005 352 ntTSL 3 BASIC8.04□□□□□ -1.12
SNX18Q96RF0 LINC01499-202ENST00000529282 563 ntTSL 4 BASIC8.04□□□□□ -1.12
SNX18Q96RF0 LINC01499-203ENST00000530379 555 ntTSL 4 BASIC8.04□□□□□ -1.12
SNX18Q96RF0 AP002812.5-201ENST00000530972 712 ntTSL 2 BASIC8.04□□□□□ -1.12
SNX18Q96RF0 HNRNPKP3-202ENST00000533565 589 ntTSL 4 BASIC8.04□□□□□ -1.12
SNX18Q96RF0 AC003002.1-201ENST00000543226 732 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
SNX18Q96RF0 AC090115.1-201ENST00000548257 562 ntTSL 4 BASIC8.04□□□□□ -1.12
SNX18Q96RF0 AC073612.1-201ENST00000548802 771 ntAPPRIS P1 TSL 3 BASIC8.04□□□□□ -1.12
SNX18Q96RF0 AL139300.2-201ENST00000556332 553 ntTSL 4 BASIC8.04□□□□□ -1.12
SNX18Q96RF0 AC023906.5-201ENST00000558607 635 ntTSL 2 BASIC8.04□□□□□ -1.12
SNX18Q96RF0 AC087481.1-201ENST00000561684 965 ntBASIC8.04□□□□□ -1.12
SNX18Q96RF0 AC093249.3-201ENST00000562444 424 ntBASIC8.04□□□□□ -1.12
SNX18Q96RF0 AC015818.2-201ENST00000563569 840 ntBASIC8.04□□□□□ -1.12
SNX18Q96RF0 AC040173.1-201ENST00000572479 580 ntTSL 4 BASIC8.04□□□□□ -1.12
SNX18Q96RF0 AC133065.3-201ENST00000577174 1161 ntBASIC8.04□□□□□ -1.12
SNX18Q96RF0 MIR3150B-201ENST00000580142 86 ntBASIC8.04□□□□□ -1.12
SNX18Q96RF0 PDLIM1P2-201ENST00000582923 607 ntBASIC8.04□□□□□ -1.12
SNX18Q96RF0 RNF157-207ENST00000592271 755 ntTSL 2 BASIC8.04□□□□□ -1.12
SNX18Q96RF0 AURKC-206ENST00000598785 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC8.04□□□□□ -1.12
SNX18Q96RF0 AC010615.2-204ENST00000600469 830 ntTSL 3 BASIC8.04□□□□□ -1.12
SNX18Q96RF0 Metazoa_SRP.169-201ENST00000613708 283 ntBASIC8.04□□□□□ -1.12
SNX18Q96RF0 STON2-209ENST00000614646 2964 ntAPPRIS ALT2 TSL 5 BASIC8.04□□□□□ -1.12
SNX18Q96RF0 PIBF1-207ENST00000615625 1098 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
SNX18Q96RF0 AC002401.3-201ENST00000620020 440 ntBASIC8.04□□□□□ -1.12
SNX18Q96RF0 PGM5P3-AS1-206ENST00000621255 877 ntTSL 5 BASIC8.04□□□□□ -1.12
SNX18Q96RF0 AL358790.1-202ENST00000632794 583 ntTSL 5 BASIC8.04□□□□□ -1.12
SNX18Q96RF0 AL627171.2-201ENST00000635177 1090 ntTSL 5 BASIC8.04□□□□□ -1.12
SNX18Q96RF0 IRAK4-201ENST00000431837 4147 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
SNX18Q96RF0 AL031595.3-201ENST00000624919 14262 ntBASIC8.04□□□□□ -1.12
SNX18Q96RF0 DIEXF-202ENST00000491415 8446 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
SNX18Q96RF0 SLC26A9-202ENST00000367134 4616 ntTSL 5 BASIC8.04□□□□□ -1.12
SNX18Q96RF0 COG2-201ENST00000366668 2843 ntAPPRIS ALT1 TSL 1 (best) BASIC8.04□□□□□ -1.12
SNX18Q96RF0 AC092718.7-201ENST00000623577 1776 ntBASIC8.04□□□□□ -1.12
SNX18Q96RF0 ZNF641-202ENST00000448928 1856 ntTSL 2 BASIC8.04□□□□□ -1.12
SNX18Q96RF0 USP32P1-201ENST00000341745 3233 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
SNX18Q96RF0 OPALIN-203ENST00000393871 3545 ntTSL 2 BASIC8.04□□□□□ -1.12
SNX18Q96RF0 MPP7-203ENST00000375732 5063 ntAPPRIS P1 TSL 2 BASIC8.04□□□□□ -1.12
SNX18Q96RF0 MCTP1-205ENST00000505208 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC8.04□□□□□ -1.12
SNX18Q96RF0 MET-202ENST00000397752 6635 ntAPPRIS P3 TSL 1 (best) BASIC8.04□□□□□ -1.12
SNX18Q96RF0 EBF1-203ENST00000517373 2277 ntTSL 5 BASIC8.04□□□□□ -1.12
SNX18Q96RF0 AOAH-211ENST00000617537 2381 ntAPPRIS P3 TSL 1 (best) BASIC8.04□□□□□ -1.12
SNX18Q96RF0 PDPR-210ENST00000568530 7223 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
SNX18Q96RF0 ZMYND8-207ENST00000396281 5511 ntAPPRIS ALT2 TSL 2 BASIC8.04□□□□□ -1.12
SNX18Q96RF0 FYTTD1-203ENST00000415708 1342 ntTSL 2 BASIC8.03□□□□□ -1.12
SNX18Q96RF0 RBBP4-201ENST00000373485 1417 ntAPPRIS ALT1 TSL 1 (best) BASIC8.03□□□□□ -1.12
SNX18Q96RF0 LINC01695-203ENST00000453420 4486 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
SNX18Q96RF0 AC022415.1-201ENST00000472362 1517 ntBASIC8.03□□□□□ -1.12
SNX18Q96RF0 PRLR-212ENST00000513753 1525 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
SNX18Q96RF0 AC007126.1-201ENST00000508202 4781 ntBASIC8.03□□□□□ -1.12
SNX18Q96RF0 ZNF605-202ENST00000360187 9340 ntAPPRIS P3 TSL 1 (best) BASIC8.03□□□□□ -1.12
SNX18Q96RF0 LINC00598-214ENST00000637523 1943 ntTSL 5 BASIC8.03□□□□□ -1.12
SNX18Q96RF0 HOOK3-201ENST00000307602 14398 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
SNX18Q96RF0 FOLH1-213ENST00000533034 2225 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
SNX18Q96RF0 RAD17-219ENST00000521422 2323 ntTSL 5 BASIC8.03□□□□□ -1.12
SNX18Q96RF0 MAPK10-354ENST00000641823 2732 ntBASIC8.03□□□□□ -1.12
SNX18Q96RF0 AP002991.2-201ENST00000623807 2801 ntBASIC8.03□□□□□ -1.12
SNX18Q96RF0 OTX2-201ENST00000339475 3001 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
SNX18Q96RF0 ATP1A2-202ENST00000392233 3338 ntTSL 5 BASIC8.03□□□□□ -1.12
SNX18Q96RF0 BUB1B-202ENST00000412359 3628 ntTSL 2 BASIC8.03□□□□□ -1.12
SNX18Q96RF0 NLGN4X-204ENST00000381095 5870 ntAPPRIS P2 TSL 1 (best) BASIC8.03□□□□□ -1.12
SNX18Q96RF0 CLDN2-203ENST00000541806 3150 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
SNX18Q96RF0 C1S-205ENST00000406697 3076 ntAPPRIS P1 TSL 2 BASIC8.03□□□□□ -1.12
SNX18Q96RF0 CPA4-201ENST00000222482 2797 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
SNX18Q96RF0 NCAM2-202ENST00000400546 8135 ntAPPRIS P2 TSL 1 (best) BASIC8.03□□□□□ -1.12
Retrieved 100 of 98,524 protein–RNA pairs in 60.3 ms