Protein–RNA interactions for Protein: P04436

T-cell receptor alpha chain V region HPB-MLT (Fragment), humanhuman

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04436 LIG3-202ENST00000378526 8400 ntAPPRIS P4 TSL 1 (best) BASIC8.02□□□□□ -1.13
P04436 AC025569.1-202ENST00000548687 5903 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
P04436 AC022486.1-201ENST00000510613 1483 ntTSL 5 BASIC8.02□□□□□ -1.13
P04436 AL353132.1-201ENST00000415260 2043 ntBASIC8.02□□□□□ -1.13
P04436 ALPK1-203ENST00000458497 5410 ntAPPRIS P3 TSL 5 BASIC8.02□□□□□ -1.13
P04436 KLF7-202ENST00000412414 7954 ntTSL 2 BASIC8.02□□□□□ -1.13
P04436 PLCE1-AS1-201ENST00000425267 1370 ntTSL 3 BASIC8.02□□□□□ -1.13
P04436 CLDN2-202ENST00000540876 2919 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
P04436 ENPP6-201ENST00000296741 3936 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
P04436 ATP5J2-202ENST00000359832 323 ntTSL 2 BASIC8.02□□□□□ -1.13
P04436 AC074254.1-201ENST00000399152 404 ntTSL 5 BASIC8.02□□□□□ -1.13
P04436 OR2A12-201ENST00000408949 1046 ntAPPRIS P1 BASIC8.02□□□□□ -1.13
P04436 LINC01353-201ENST00000412772 775 ntTSL 3 BASIC8.02□□□□□ -1.13
P04436 SMIM12-201ENST00000417239 684 ntAPPRIS P1 TSL 3 BASIC8.02□□□□□ -1.13
P04436 RPL7L1P12-201ENST00000417594 729 ntBASIC8.02□□□□□ -1.13
P04436 LINC00630-202ENST00000420471 838 ntTSL 3 BASIC8.02□□□□□ -1.13
P04436 AL450311.1-201ENST00000434931 576 ntTSL 4 BASIC8.02□□□□□ -1.13
P04436 C5orf67-201ENST00000438651 765 ntAPPRIS P2 TSL 3 BASIC8.02□□□□□ -1.13
P04436 AL356310.1-201ENST00000452024 585 ntTSL 3 BASIC8.02□□□□□ -1.13
P04436 NDUFB11P1-201ENST00000455818 465 ntBASIC8.02□□□□□ -1.13
P04436 AC018638.4-201ENST00000465971 1150 ntBASIC8.02□□□□□ -1.13
P04436 ARHGAP31-AS1-201ENST00000466292 624 ntTSL 4 BASIC8.02□□□□□ -1.13
P04436 AC002384.1-202ENST00000470135 673 ntTSL 5 BASIC8.02□□□□□ -1.13
P04436 TRIM2-207ENST00000482578 773 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
P04436 RPS10P16-201ENST00000483812 496 ntBASIC8.02□□□□□ -1.13
P04436 HULC-201ENST00000503668 556 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
P04436 UCHL1-AS1-202ENST00000510073 451 ntTSL 3 BASIC8.02□□□□□ -1.13
P04436 AC008632.1-201ENST00000519400 753 ntTSL 3 BASIC8.02□□□□□ -1.13
P04436 AC100818.1-202ENST00000523748 578 ntTSL 4 BASIC8.02□□□□□ -1.13
P04436 LINC01499-202ENST00000529282 563 ntTSL 4 BASIC8.02□□□□□ -1.13
P04436 LINC01499-203ENST00000530379 555 ntTSL 4 BASIC8.02□□□□□ -1.13
P04436 SLC5A4P1-201ENST00000532944 612 ntBASIC8.02□□□□□ -1.13
P04436 NUTF2P6-201ENST00000560892 385 ntBASIC8.02□□□□□ -1.13
P04436 GATA6-AS1-201ENST00000579431 481 ntTSL 3 BASIC8.02□□□□□ -1.13
P04436 TBX18-AS1-208ENST00000591225 762 ntTSL 5 BASIC8.02□□□□□ -1.13
P04436 AC008991.1-201ENST00000591285 537 ntTSL 4 BASIC8.02□□□□□ -1.13
P04436 AC013553.3-201ENST00000612943 615 ntBASIC8.02□□□□□ -1.13
P04436 GNG2-216ENST00000615906 1294 ntAPPRIS P1 TSL 5 BASIC8.02□□□□□ -1.13
P04436 AC087645.3-201ENST00000624708 587 ntBASIC8.02□□□□□ -1.13
P04436 HLA-B-258ENST00000640615 240 ntBASIC8.02□□□□□ -1.13
P04436 CHD2-212ENST00000627622 1740 ntTSL 2 BASIC8.02□□□□□ -1.13
P04436 KIAA1328-207ENST00000591619 5881 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
P04436 LINC00837-201ENST00000443246 3991 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
P04436 PTBP3-205ENST00000374257 7240 ntAPPRIS ALT1 TSL 2 BASIC8.02□□□□□ -1.13
P04436 CEP63-201ENST00000332047 2056 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
P04436 ALDH7A1-227ENST00000636879 2501 ntTSL 5 BASIC8.02□□□□□ -1.13
P04436 KCNMA1-273ENST00000639913 12071 ntAPPRIS ALT2 TSL 5 BASIC8.02□□□□□ -1.13
P04436 RNF14-205ENST00000394520 4235 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
P04436 AL365217.1-201ENST00000398578 2436 ntBASIC8.02□□□□□ -1.13
P04436 POLR3B-202ENST00000539066 4118 ntTSL 2 BASIC8.02□□□□□ -1.13
P04436 COL6A6-201ENST00000358511 9581 ntAPPRIS P1 TSL 5 BASIC8.02□□□□□ -1.13
P04436 ZNF726-201ENST00000322487 2330 ntAPPRIS P1 TSL 5 BASIC8.02□□□□□ -1.13
P04436 ZNF445-202ENST00000425708 10052 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
P04436 UBA1-203ENST00000377351 3466 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
P04436 AC120114.1-201ENST00000450909 1762 ntTSL 3 BASIC8.02□□□□□ -1.13
P04436 PLS3-AS1-202ENST00000607680 1763 ntTSL 2 BASIC8.02□□□□□ -1.13
P04436 MFSD1P1-201ENST00000576210 1327 ntBASIC8.02□□□□□ -1.13
P04436 LPP-208ENST00000448637 5835 ntTSL 5 BASIC8.02□□□□□ -1.13
P04436 HS3ST5-202ENST00000411826 2744 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
P04436 RTTN-222ENST00000640769 8088 ntAPPRIS P1 TSL 2 BASIC8.01□□□□□ -1.13
P04436 LINC02072-201ENST00000441895 2645 ntTSL 2 BASIC8.01□□□□□ -1.13
P04436 SBF2-201ENST00000256190 7439 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
P04436 ARID1A-209ENST00000615191 3804 ntTSL 5 BASIC8.01□□□□□ -1.13
P04436 NNT-AS1-204ENST00000513560 4769 ntTSL 2 BASIC8.01□□□□□ -1.13
P04436 NR1I3-205ENST00000367983 1473 ntAPPRIS P3 TSL 1 (best) BASIC8.01□□□□□ -1.13
P04436 AC019117.2-202ENST00000635900 1476 ntTSL 5 BASIC8.01□□□□□ -1.13
P04436 RNF138-201ENST00000257190 2071 ntTSL 2 BASIC8.01□□□□□ -1.13
P04436 CEP44-204ENST00000457424 3290 ntTSL 2 BASIC8.01□□□□□ -1.13
P04436 ERCC4-201ENST00000311895 6758 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
P04436 RNF41-212ENST00000615206 5216 ntAPPRIS P1 TSL 5 BASIC8.01□□□□□ -1.13
P04436 NHSL2-208ENST00000639939 3402 ntTSL 5 BASIC8.01□□□□□ -1.13
P04436 RN7SKP75-201ENST00000363070 296 ntBASIC8.01□□□□□ -1.13
P04436 SERPINB8-204ENST00000397988 1178 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
P04436 RNA5SP209-201ENST00000411237 97 ntBASIC8.01□□□□□ -1.13
P04436 AC099560.1-201ENST00000412811 500 ntTSL 4 BASIC8.01□□□□□ -1.13
P04436 OR2L6P-201ENST00000416377 940 ntBASIC8.01□□□□□ -1.13
P04436 AL121990.1-201ENST00000417605 591 ntTSL 3 BASIC8.01□□□□□ -1.13
P04436 AL441943.3-201ENST00000418524 587 ntTSL 5 BASIC8.01□□□□□ -1.13
P04436 TIMM8AP1-201ENST00000419283 295 ntBASIC8.01□□□□□ -1.13
P04436 AC006460.1-201ENST00000421437 808 ntTSL 5 BASIC8.01□□□□□ -1.13
P04436 AC018641.1-201ENST00000435950 796 ntBASIC8.01□□□□□ -1.13
P04436 HSPA8P3-201ENST00000449300 780 ntBASIC8.01□□□□□ -1.13
P04436 AC009229.1-201ENST00000450854 622 ntTSL 4 BASIC8.01□□□□□ -1.13
P04436 LINC01647-201ENST00000453135 1285 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
P04436 LINC00945-201ENST00000453716 753 ntTSL 5 BASIC8.01□□□□□ -1.13
P04436 DAP3P2-201ENST00000458547 510 ntBASIC8.01□□□□□ -1.13
P04436 AC025062.1-201ENST00000465163 644 ntBASIC8.01□□□□□ -1.13
P04436 RPL12P5-201ENST00000475149 392 ntBASIC8.01□□□□□ -1.13
P04436 DNAJC19-205ENST00000479269 610 ntTSL 3 BASIC8.01□□□□□ -1.13
P04436 ACTG1P20-201ENST00000486001 468 ntBASIC8.01□□□□□ -1.13
P04436 SERPINB5-205ENST00000489441 1268 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
P04436 RN7SL472P-201ENST00000492799 293 ntBASIC8.01□□□□□ -1.13
P04436 AC025244.1-201ENST00000505930 469 ntTSL 3 BASIC8.01□□□□□ -1.13
P04436 LINC01438-201ENST00000512794 556 ntTSL 4 BASIC8.01□□□□□ -1.13
P04436 LINC00499-204ENST00000515282 579 ntTSL 5 BASIC8.01□□□□□ -1.13
P04436 SOX5-213ENST00000541847 758 ntTSL 3 BASIC8.01□□□□□ -1.13
P04436 NUDT4-205ENST00000548662 765 ntTSL 3 BASIC8.01□□□□□ -1.13
P04436 AC090213.1-201ENST00000586841 546 ntTSL 4 BASIC8.01□□□□□ -1.13
P04436 AC233702.11-201ENST00000598588 333 ntBASIC8.01□□□□□ -1.13
P04436 LGALS17A-205ENST00000598736 1111 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
Retrieved 100 of 98,524 protein–RNA pairs in 61.6 ms