Protein–RNA interactions for Protein: O95155

UBE4B, Ubiquitin conjugation factor E4 B, humanhuman

Predictions only

Length 1,302 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4BO95155 ANP32E-203ENST00000436748 1339 ntTSL 2 BASIC9.54□□□□□ -0.88
UBE4BO95155 AL929601.3-201ENST00000613990 2086 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
UBE4BO95155 ERMAP-201ENST00000328249 3949 ntAPPRIS ALT2 TSL 1 (best) BASIC9.54□□□□□ -0.88
UBE4BO95155 MAPK10-205ENST00000395160 2448 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
UBE4BO95155 OR3A1-201ENST00000323404 1650 ntAPPRIS P1 BASIC9.54□□□□□ -0.88
UBE4BO95155 TTTY6-201ENST00000253838 491 ntTSL 2 BASIC9.54□□□□□ -0.88
UBE4BO95155 TTTY6B-201ENST00000253848 491 ntTSL 3 BASIC9.54□□□□□ -0.88
UBE4BO95155 MORN5-201ENST00000373764 705 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
UBE4BO95155 COX17P1-201ENST00000378775 192 ntBASIC9.54□□□□□ -0.88
UBE4BO95155 MIR185-201ENST00000385288 82 ntBASIC9.54□□□□□ -0.88
UBE4BO95155 IGLV1-51-201ENST00000390290 389 ntAPPRIS P1 BASIC9.54□□□□□ -0.88
UBE4BO95155 TTC23-203ENST00000394132 3849 ntAPPRIS P2 TSL 1 (best) BASIC9.54□□□□□ -0.88
UBE4BO95155 KRTAP9-1-201ENST00000398470 753 ntBASIC9.54□□□□□ -0.88
UBE4BO95155 LINC02449-202ENST00000399866 517 ntTSL 3 BASIC9.54□□□□□ -0.88
UBE4BO95155 RN7SKP154-201ENST00000410136 290 ntBASIC9.54□□□□□ -0.88
UBE4BO95155 AC016027.1-201ENST00000426483 805 ntTSL 3 BASIC9.54□□□□□ -0.88
UBE4BO95155 AL159166.1-201ENST00000437430 329 ntTSL 3 BASIC9.54□□□□□ -0.88
UBE4BO95155 DEFT1P-201ENST00000453425 496 ntBASIC9.54□□□□□ -0.88
UBE4BO95155 PAQR9-AS1-201ENST00000478823 610 ntTSL 3 BASIC9.54□□□□□ -0.88
UBE4BO95155 LINCR-0001-201ENST00000517732 562 ntTSL 4 BASIC9.54□□□□□ -0.88
UBE4BO95155 IGHV3-36-201ENST00000520848 401 ntBASIC9.54□□□□□ -0.88
UBE4BO95155 AC144568.2-201ENST00000522481 944 ntTSL 5 BASIC9.54□□□□□ -0.88
UBE4BO95155 LINC01024-206ENST00000522747 1044 ntTSL 3 BASIC9.54□□□□□ -0.88
UBE4BO95155 LINC02134-201ENST00000562980 557 ntTSL 5 BASIC9.54□□□□□ -0.88
UBE4BO95155 AC100843.3-201ENST00000591796 259 ntBASIC9.54□□□□□ -0.88
UBE4BO95155 AC025031.3-201ENST00000611566 368 ntBASIC9.54□□□□□ -0.88
UBE4BO95155 ALG13-226ENST00000622986 582 ntTSL 2 BASIC9.54□□□□□ -0.88
UBE4BO95155 ADD3-AS1-203ENST00000625954 472 ntTSL 3 BASIC9.54□□□□□ -0.88
UBE4BO95155 KRTAP9-1-202ENST00000634235 351 ntAPPRIS P1 TSL 5 BASIC9.54□□□□□ -0.88
UBE4BO95155 FAAHP1-207ENST00000635606 398 ntTSL 3 BASIC9.54□□□□□ -0.88
UBE4BO95155 POU6F2-201ENST00000403058 2335 ntTSL 5 BASIC9.54□□□□□ -0.88
UBE4BO95155 TCAF1-201ENST00000355951 3343 ntAPPRIS ALT1 TSL 1 (best) BASIC9.53□□□□□ -0.88
UBE4BO95155 AP003025.2-202ENST00000414466 4335 ntTSL 2 BASIC9.53□□□□□ -0.88
UBE4BO95155 OR9I1-202ENST00000641439 3184 ntAPPRIS P1 BASIC9.53□□□□□ -0.88
UBE4BO95155 LINC00608-202ENST00000432733 2818 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
UBE4BO95155 SNCA-206ENST00000420646 3127 ntTSL 2 BASIC9.53□□□□□ -0.88
UBE4BO95155 AL390728.4-201ENST00000421406 1465 ntBASIC9.53□□□□□ -0.88
UBE4BO95155 AC026746.1-201ENST00000505623 2105 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
UBE4BO95155 PPWD1-215ENST00000538977 2055 ntTSL 2 BASIC9.53□□□□□ -0.88
UBE4BO95155 RBBP9-201ENST00000337227 3861 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
UBE4BO95155 KANK1-205ENST00000382297 5051 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
UBE4BO95155 STRADA-227ENST00000638309 1383 ntTSL 5 BASIC9.53□□□□□ -0.88
UBE4BO95155 NLRP3-204ENST00000366497 4318 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
UBE4BO95155 C16orf62-205ENST00000513947 2501 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
UBE4BO95155 AL133230.1-201ENST00000431019 4587 ntTSL 2 BASIC9.53□□□□□ -0.88
UBE4BO95155 CEACAM21-201ENST00000187608 1300 ntAPPRIS ALT2 TSL 1 (best) BASIC9.53□□□□□ -0.88
UBE4BO95155 CAND1-208ENST00000545606 11251 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
UBE4BO95155 TRIM66-201ENST00000299550 9753 ntAPPRIS ALT2 TSL 5 BASIC9.53□□□□□ -0.88
UBE4BO95155 AP000769.1-204ENST00000309775 800 ntTSL 5 BASIC9.53□□□□□ -0.88
UBE4BO95155 MIR1306-201ENST00000408439 85 ntBASIC9.53□□□□□ -0.88
UBE4BO95155 RN7SKP169-201ENST00000411124 291 ntBASIC9.53□□□□□ -0.88
UBE4BO95155 CYCSP5-201ENST00000415043 297 ntBASIC9.53□□□□□ -0.88
UBE4BO95155 AL450384.2-201ENST00000425669 1028 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
UBE4BO95155 AL359541.1-201ENST00000431097 575 ntTSL 3 BASIC9.53□□□□□ -0.88
UBE4BO95155 RPE-210ENST00000438204 796 ntTSL 2 BASIC9.53□□□□□ -0.88
UBE4BO95155 RPE-213ENST00000445268 668 ntTSL 5 BASIC9.53□□□□□ -0.88
UBE4BO95155 LINC02037-201ENST00000455821 1195 ntTSL 5 BASIC9.53□□□□□ -0.88
UBE4BO95155 AC004448.4-203ENST00000456537 441 ntTSL 3 BASIC9.53□□□□□ -0.88
UBE4BO95155 AC009927.2-201ENST00000520812 481 ntBASIC9.53□□□□□ -0.88
UBE4BO95155 RPS3-207ENST00000526608 710 ntTSL 5 BASIC9.53□□□□□ -0.88
UBE4BO95155 AC027779.1-201ENST00000530492 516 ntTSL 3 BASIC9.53□□□□□ -0.88
UBE4BO95155 ST3GAL3-237ENST00000533933 834 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
UBE4BO95155 CRYAB-215ENST00000533971 981 ntTSL 2 BASIC9.53□□□□□ -0.88
UBE4BO95155 ANAPC15-211ENST00000542531 812 ntAPPRIS P3 TSL 5 BASIC9.53□□□□□ -0.88
UBE4BO95155 ULK4P3-202ENST00000565158 593 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
UBE4BO95155 AP001496.2-202ENST00000579933 977 ntTSL 5 BASIC9.53□□□□□ -0.88
UBE4BO95155 AC243960.5-201ENST00000597858 255 ntBASIC9.53□□□□□ -0.88
UBE4BO95155 AL122127.1-201ENST00000603832 327 ntBASIC9.53□□□□□ -0.88
UBE4BO95155 AP000590.1-201ENST00000624943 464 ntBASIC9.53□□□□□ -0.88
UBE4BO95155 LINC02009-201ENST00000635852 2951 ntTSL 3 BASIC9.53□□□□□ -0.88
UBE4BO95155 THBS3-211ENST00000541990 2928 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
UBE4BO95155 PPFIA2-220ENST00000550584 5405 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
UBE4BO95155 SLC7A2-202ENST00000398090 7557 ntAPPRIS P3 TSL 1 (best) BASIC9.53□□□□□ -0.88
UBE4BO95155 PAQR5-205ENST00000561153 2347 ntAPPRIS P1 TSL 5 BASIC9.52□□□□□ -0.88
UBE4BO95155 PHLDB2-207ENST00000477695 5813 ntTSL 1 (best) BASIC9.52□□□□□ -0.88
UBE4BO95155 KCNK2-201ENST00000391894 1491 ntAPPRIS P3 TSL 1 (best) BASIC9.52□□□□□ -0.88
UBE4BO95155 OR1S1-202ENST00000641544 1474 ntAPPRIS P1 BASIC9.52□□□□□ -0.88
UBE4BO95155 CARF-201ENST00000320443 5209 ntTSL 2 BASIC9.52□□□□□ -0.88
UBE4BO95155 SIRPD-202ENST00000381623 1958 ntAPPRIS P2 TSL 1 (best) BASIC9.52□□□□□ -0.88
UBE4BO95155 HMGCLL1-201ENST00000274901 2475 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
UBE4BO95155 KRIT1-204ENST00000394507 4762 ntAPPRIS P1 TSL 5 BASIC9.52□□□□□ -0.89
UBE4BO95155 ZNF143-204ENST00000396604 2696 ntAPPRIS ALT1 TSL 5 BASIC9.52□□□□□ -0.89
UBE4BO95155 ZEB2-215ENST00000465070 2949 ntTSL 2 BASIC9.52□□□□□ -0.89
UBE4BO95155 ZSCAN5B-201ENST00000358992 1626 ntAPPRIS P1 TSL 5 BASIC9.52□□□□□ -0.89
UBE4BO95155 SRPK2-214ENST00000489828 2560 ntAPPRIS P3 TSL 1 (best) BASIC9.52□□□□□ -0.89
UBE4BO95155 BBS9-203ENST00000355070 4004 ntAPPRIS P3 TSL 5 BASIC9.52□□□□□ -0.89
UBE4BO95155 SNCA-201ENST00000336904 3041 ntAPPRIS P1 TSL 2 BASIC9.52□□□□□ -0.89
UBE4BO95155 MIR4458HG-203ENST00000606459 3239 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
UBE4BO95155 KIF2C-201ENST00000372217 2955 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
UBE4BO95155 SCMH1-203ENST00000361191 2906 ntTSL 5 BASIC9.52□□□□□ -0.89
UBE4BO95155 NCKAP1L-202ENST00000545638 3612 ntTSL 2 BASIC9.52□□□□□ -0.89
UBE4BO95155 PLEKHG4B-201ENST00000283426 11515 ntAPPRIS P2 TSL 1 (best) BASIC9.52□□□□□ -0.89
UBE4BO95155 AC005722.2-201ENST00000577087 3370 ntBASIC9.52□□□□□ -0.89
UBE4BO95155 ZNF23-202ENST00000358700 2692 ntTSL 5 BASIC9.52□□□□□ -0.89
UBE4BO95155 TPM3-201ENST00000271850 1219 ntAPPRIS ALT1 TSL 5 BASIC9.52□□□□□ -0.89
UBE4BO95155 TMEM138-202ENST00000381787 1205 ntTSL 2 BASIC9.52□□□□□ -0.89
UBE4BO95155 ZNF839P1-201ENST00000403487 861 ntBASIC9.52□□□□□ -0.89
UBE4BO95155 STSP1-201ENST00000412493 1151 ntBASIC9.52□□□□□ -0.89
UBE4BO95155 AC003087.1-201ENST00000412828 499 ntTSL 3 BASIC9.52□□□□□ -0.89
UBE4BO95155 SEM1-203ENST00000413065 661 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
Retrieved 100 of 98,524 protein–RNA pairs in 148 ms