Protein–RNA interactions for Protein: Q9Y4Z0

LSM4, U6 snRNA-associated Sm-like protein LSm4, humanhuman

Known RBP Predictions only

Length 139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4Q9Y4Z0 COX20-201ENST00000366528 568 ntTSL 2 BASIC16.31■□□□□ 0.2
LSM4Q9Y4Z0 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
LSM4Q9Y4Z0 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
LSM4Q9Y4Z0 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
LSM4Q9Y4Z0 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC16.31■□□□□ 0.2
LSM4Q9Y4Z0 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC16.31■□□□□ 0.2
LSM4Q9Y4Z0 DBI-210ENST00000542275 757 ntTSL 5 BASIC16.31■□□□□ 0.2
LSM4Q9Y4Z0 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC16.31■□□□□ 0.2
LSM4Q9Y4Z0 GXYLT1P5-201ENST00000614548 1189 ntBASIC16.31■□□□□ 0.2
LSM4Q9Y4Z0 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
LSM4Q9Y4Z0 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
LSM4Q9Y4Z0 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC16.31■□□□□ 0.2
LSM4Q9Y4Z0 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
LSM4Q9Y4Z0 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC16.31■□□□□ 0.2
LSM4Q9Y4Z0 FP700111.2-201ENST00000619190 1892 ntBASIC16.31■□□□□ 0.2
LSM4Q9Y4Z0 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
LSM4Q9Y4Z0 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
LSM4Q9Y4Z0 BX005040.4-201ENST00000637145 1518 ntBASIC16.3■□□□□ 0.2
LSM4Q9Y4Z0 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
LSM4Q9Y4Z0 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC16.3■□□□□ 0.2
LSM4Q9Y4Z0 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
LSM4Q9Y4Z0 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC16.3■□□□□ 0.2
LSM4Q9Y4Z0 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC16.3■□□□□ 0.2
LSM4Q9Y4Z0 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
LSM4Q9Y4Z0 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
LSM4Q9Y4Z0 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
LSM4Q9Y4Z0 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
LSM4Q9Y4Z0 AC026185.1-201ENST00000445748 174 ntBASIC16.3■□□□□ 0.2
LSM4Q9Y4Z0 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC16.3■□□□□ 0.2
LSM4Q9Y4Z0 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC16.3■□□□□ 0.2
LSM4Q9Y4Z0 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
LSM4Q9Y4Z0 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC16.3■□□□□ 0.2
LSM4Q9Y4Z0 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
LSM4Q9Y4Z0 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
LSM4Q9Y4Z0 PXK-203ENST00000383715 1756 ntTSL 5 BASIC16.3■□□□□ 0.2
LSM4Q9Y4Z0 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
LSM4Q9Y4Z0 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
LSM4Q9Y4Z0 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
LSM4Q9Y4Z0 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
LSM4Q9Y4Z0 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
LSM4Q9Y4Z0 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
LSM4Q9Y4Z0 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
LSM4Q9Y4Z0 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC16.3■□□□□ 0.2
LSM4Q9Y4Z0 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC16.3■□□□□ 0.2
LSM4Q9Y4Z0 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC16.3■□□□□ 0.2
LSM4Q9Y4Z0 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
LSM4Q9Y4Z0 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC16.29■□□□□ 0.2
LSM4Q9Y4Z0 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC16.29■□□□□ 0.2
LSM4Q9Y4Z0 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
LSM4Q9Y4Z0 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
LSM4Q9Y4Z0 AC112907.3-201ENST00000577781 2400 ntBASIC16.29■□□□□ 0.2
LSM4Q9Y4Z0 AC099778.1-201ENST00000568593 1911 ntBASIC16.29■□□□□ 0.2
LSM4Q9Y4Z0 AC009237.3-201ENST00000393279 1427 ntBASIC16.29■□□□□ 0.2
LSM4Q9Y4Z0 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
LSM4Q9Y4Z0 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC16.29■□□□□ 0.2
LSM4Q9Y4Z0 AC055733.4-201ENST00000638462 1354 ntBASIC16.29■□□□□ 0.2
LSM4Q9Y4Z0 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC16.29■□□□□ 0.2
LSM4Q9Y4Z0 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
LSM4Q9Y4Z0 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
LSM4Q9Y4Z0 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
LSM4Q9Y4Z0 EMC9-206ENST00000560403 872 ntTSL 2 BASIC16.29■□□□□ 0.2
LSM4Q9Y4Z0 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
LSM4Q9Y4Z0 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC16.29■□□□□ 0.2
LSM4Q9Y4Z0 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
LSM4Q9Y4Z0 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
LSM4Q9Y4Z0 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC16.29■□□□□ 0.2
LSM4Q9Y4Z0 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
LSM4Q9Y4Z0 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
LSM4Q9Y4Z0 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC16.29■□□□□ 0.2
LSM4Q9Y4Z0 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
LSM4Q9Y4Z0 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
LSM4Q9Y4Z0 AC004854.2-201ENST00000608450 1441 ntBASIC16.28■□□□□ 0.2
LSM4Q9Y4Z0 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
LSM4Q9Y4Z0 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
LSM4Q9Y4Z0 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
LSM4Q9Y4Z0 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
LSM4Q9Y4Z0 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC16.28■□□□□ 0.2
LSM4Q9Y4Z0 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
LSM4Q9Y4Z0 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
LSM4Q9Y4Z0 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
LSM4Q9Y4Z0 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
LSM4Q9Y4Z0 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
LSM4Q9Y4Z0 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC16.28■□□□□ 0.2
LSM4Q9Y4Z0 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
LSM4Q9Y4Z0 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
LSM4Q9Y4Z0 PPP1R14BP3-201ENST00000509033 445 ntBASIC16.28■□□□□ 0.2
LSM4Q9Y4Z0 BID-214ENST00000617586 542 ntTSL 5 BASIC16.28■□□□□ 0.2
LSM4Q9Y4Z0 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC16.28■□□□□ 0.2
LSM4Q9Y4Z0 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
LSM4Q9Y4Z0 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
LSM4Q9Y4Z0 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
LSM4Q9Y4Z0 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC16.28■□□□□ 0.2
LSM4Q9Y4Z0 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
LSM4Q9Y4Z0 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC16.28■□□□□ 0.2
LSM4Q9Y4Z0 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
LSM4Q9Y4Z0 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
LSM4Q9Y4Z0 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
LSM4Q9Y4Z0 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC16.27■□□□□ 0.2
LSM4Q9Y4Z0 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
LSM4Q9Y4Z0 EXOC3-AS1-202ENST00000623673 1663 ntBASIC16.27■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 16.6 ms