Protein–RNA interactions for Protein: Q9Y2B5

VPS9D1, VPS9 domain-containing protein 1, humanhuman

Predictions only

Length 631 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1Q9Y2B5 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
VPS9D1Q9Y2B5 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
VPS9D1Q9Y2B5 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC20.28■□□□□ 0.84
VPS9D1Q9Y2B5 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
VPS9D1Q9Y2B5 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC20.27■□□□□ 0.84
VPS9D1Q9Y2B5 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
VPS9D1Q9Y2B5 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
VPS9D1Q9Y2B5 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
VPS9D1Q9Y2B5 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC20.27■□□□□ 0.84
VPS9D1Q9Y2B5 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
VPS9D1Q9Y2B5 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC20.27■□□□□ 0.84
VPS9D1Q9Y2B5 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
VPS9D1Q9Y2B5 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC20.27■□□□□ 0.84
VPS9D1Q9Y2B5 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
VPS9D1Q9Y2B5 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
VPS9D1Q9Y2B5 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
VPS9D1Q9Y2B5 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC20.27■□□□□ 0.84
VPS9D1Q9Y2B5 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC20.27■□□□□ 0.84
VPS9D1Q9Y2B5 AL162430.1-201ENST00000480705 870 ntBASIC20.27■□□□□ 0.84
VPS9D1Q9Y2B5 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC20.27■□□□□ 0.84
VPS9D1Q9Y2B5 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC20.27■□□□□ 0.84
VPS9D1Q9Y2B5 MFSD11-216ENST00000590393 1141 ntBASIC20.27■□□□□ 0.84
VPS9D1Q9Y2B5 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
VPS9D1Q9Y2B5 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
VPS9D1Q9Y2B5 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC20.27■□□□□ 0.84
VPS9D1Q9Y2B5 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
VPS9D1Q9Y2B5 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC20.27■□□□□ 0.84
VPS9D1Q9Y2B5 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
VPS9D1Q9Y2B5 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
VPS9D1Q9Y2B5 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
VPS9D1Q9Y2B5 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC20.26■□□□□ 0.83
VPS9D1Q9Y2B5 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
VPS9D1Q9Y2B5 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
VPS9D1Q9Y2B5 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
VPS9D1Q9Y2B5 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
VPS9D1Q9Y2B5 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
VPS9D1Q9Y2B5 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC20.26■□□□□ 0.83
VPS9D1Q9Y2B5 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC20.26■□□□□ 0.83
VPS9D1Q9Y2B5 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC20.26■□□□□ 0.83
VPS9D1Q9Y2B5 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC20.26■□□□□ 0.83
VPS9D1Q9Y2B5 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
VPS9D1Q9Y2B5 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC20.26■□□□□ 0.83
VPS9D1Q9Y2B5 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
VPS9D1Q9Y2B5 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
VPS9D1Q9Y2B5 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC20.26■□□□□ 0.83
VPS9D1Q9Y2B5 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
VPS9D1Q9Y2B5 AL121603.2-201ENST00000557373 2117 ntBASIC20.26■□□□□ 0.83
VPS9D1Q9Y2B5 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
VPS9D1Q9Y2B5 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC20.25■□□□□ 0.83
VPS9D1Q9Y2B5 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC20.25■□□□□ 0.83
VPS9D1Q9Y2B5 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC20.25■□□□□ 0.83
VPS9D1Q9Y2B5 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
VPS9D1Q9Y2B5 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
VPS9D1Q9Y2B5 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
VPS9D1Q9Y2B5 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC20.25■□□□□ 0.83
VPS9D1Q9Y2B5 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
VPS9D1Q9Y2B5 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
VPS9D1Q9Y2B5 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC20.25■□□□□ 0.83
VPS9D1Q9Y2B5 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
VPS9D1Q9Y2B5 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
VPS9D1Q9Y2B5 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
VPS9D1Q9Y2B5 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC20.25■□□□□ 0.83
VPS9D1Q9Y2B5 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC20.25■□□□□ 0.83
VPS9D1Q9Y2B5 KRT8P36-201ENST00000489121 1440 ntBASIC20.25■□□□□ 0.83
VPS9D1Q9Y2B5 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
VPS9D1Q9Y2B5 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
VPS9D1Q9Y2B5 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC20.24■□□□□ 0.83
VPS9D1Q9Y2B5 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC20.24■□□□□ 0.83
VPS9D1Q9Y2B5 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC20.24■□□□□ 0.83
VPS9D1Q9Y2B5 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
VPS9D1Q9Y2B5 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
VPS9D1Q9Y2B5 VMO1-204ENST00000441199 741 ntTSL 2 BASIC20.24■□□□□ 0.83
VPS9D1Q9Y2B5 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
VPS9D1Q9Y2B5 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
VPS9D1Q9Y2B5 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
VPS9D1Q9Y2B5 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC20.24■□□□□ 0.83
VPS9D1Q9Y2B5 BID-214ENST00000617586 542 ntTSL 5 BASIC20.24■□□□□ 0.83
VPS9D1Q9Y2B5 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
VPS9D1Q9Y2B5 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
VPS9D1Q9Y2B5 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
VPS9D1Q9Y2B5 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
VPS9D1Q9Y2B5 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC20.24■□□□□ 0.83
VPS9D1Q9Y2B5 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
VPS9D1Q9Y2B5 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC20.24■□□□□ 0.83
VPS9D1Q9Y2B5 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
VPS9D1Q9Y2B5 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC20.23■□□□□ 0.83
VPS9D1Q9Y2B5 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC20.23■□□□□ 0.83
VPS9D1Q9Y2B5 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
VPS9D1Q9Y2B5 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
VPS9D1Q9Y2B5 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
VPS9D1Q9Y2B5 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC20.23■□□□□ 0.83
VPS9D1Q9Y2B5 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
VPS9D1Q9Y2B5 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC20.23■□□□□ 0.83
VPS9D1Q9Y2B5 UQCRFS1P1-201ENST00000435169 820 ntBASIC20.23■□□□□ 0.83
VPS9D1Q9Y2B5 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
VPS9D1Q9Y2B5 AC011767.1-201ENST00000617410 1153 ntBASIC20.23■□□□□ 0.83
VPS9D1Q9Y2B5 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
VPS9D1Q9Y2B5 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC20.23■□□□□ 0.83
VPS9D1Q9Y2B5 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
VPS9D1Q9Y2B5 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC20.23■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 44.6 ms