Protein–RNA interactions for Protein: Q9UK58

CCNL1, Cyclin-L1, humanhuman

Predicted RBP Predictions only

Length 526 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNL1Q9UK58 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC26.21■■□□□ 1.79
CCNL1Q9UK58 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC26.21■■□□□ 1.79
CCNL1Q9UK58 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC26.21■■□□□ 1.79
CCNL1Q9UK58 RBM17P1-201ENST00000453646 1190 ntBASIC26.21■■□□□ 1.79
CCNL1Q9UK58 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC26.21■■□□□ 1.79
CCNL1Q9UK58 RNF146-204ENST00000476956 884 ntTSL 2 BASIC26.21■■□□□ 1.79
CCNL1Q9UK58 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC26.21■■□□□ 1.79
CCNL1Q9UK58 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC26.21■■□□□ 1.79
CCNL1Q9UK58 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC26.21■■□□□ 1.79
CCNL1Q9UK58 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC26.21■■□□□ 1.79
CCNL1Q9UK58 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC26.21■■□□□ 1.79
CCNL1Q9UK58 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC26.21■■□□□ 1.79
CCNL1Q9UK58 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC26.21■■□□□ 1.79
CCNL1Q9UK58 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC26.21■■□□□ 1.79
CCNL1Q9UK58 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC26.21■■□□□ 1.79
CCNL1Q9UK58 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.79
CCNL1Q9UK58 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.79
CCNL1Q9UK58 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.79
CCNL1Q9UK58 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.79
CCNL1Q9UK58 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC26.2■■□□□ 1.78
CCNL1Q9UK58 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
CCNL1Q9UK58 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC26.2■■□□□ 1.78
CCNL1Q9UK58 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC26.2■■□□□ 1.78
CCNL1Q9UK58 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC26.2■■□□□ 1.78
CCNL1Q9UK58 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC26.2■■□□□ 1.78
CCNL1Q9UK58 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
CCNL1Q9UK58 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC26.2■■□□□ 1.78
CCNL1Q9UK58 AL121829.2-201ENST00000620908 328 ntBASIC26.2■■□□□ 1.78
CCNL1Q9UK58 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
CCNL1Q9UK58 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
CCNL1Q9UK58 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
CCNL1Q9UK58 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC26.19■■□□□ 1.78
CCNL1Q9UK58 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC26.19■■□□□ 1.78
CCNL1Q9UK58 AC079598.2-202ENST00000546624 1451 ntBASIC26.19■■□□□ 1.78
CCNL1Q9UK58 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC26.19■■□□□ 1.78
CCNL1Q9UK58 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC26.19■■□□□ 1.78
CCNL1Q9UK58 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC26.19■■□□□ 1.78
CCNL1Q9UK58 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC26.19■■□□□ 1.78
CCNL1Q9UK58 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC26.19■■□□□ 1.78
CCNL1Q9UK58 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC26.19■■□□□ 1.78
CCNL1Q9UK58 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC26.19■■□□□ 1.78
CCNL1Q9UK58 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
CCNL1Q9UK58 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
CCNL1Q9UK58 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC26.19■■□□□ 1.78
CCNL1Q9UK58 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC26.19■■□□□ 1.78
CCNL1Q9UK58 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
CCNL1Q9UK58 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC26.19■■□□□ 1.78
CCNL1Q9UK58 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC26.18■■□□□ 1.78
CCNL1Q9UK58 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC26.18■■□□□ 1.78
CCNL1Q9UK58 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
CCNL1Q9UK58 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC26.18■■□□□ 1.78
CCNL1Q9UK58 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC26.18■■□□□ 1.78
CCNL1Q9UK58 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
CCNL1Q9UK58 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC26.18■■□□□ 1.78
CCNL1Q9UK58 KRT18P57-201ENST00000443599 1254 ntBASIC26.18■■□□□ 1.78
CCNL1Q9UK58 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC26.18■■□□□ 1.78
CCNL1Q9UK58 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC26.18■■□□□ 1.78
CCNL1Q9UK58 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC26.18■■□□□ 1.78
CCNL1Q9UK58 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC26.18■■□□□ 1.78
CCNL1Q9UK58 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC26.18■■□□□ 1.78
CCNL1Q9UK58 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC26.18■■□□□ 1.78
CCNL1Q9UK58 AP000525.1-201ENST00000608286 694 ntBASIC26.18■■□□□ 1.78
CCNL1Q9UK58 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
CCNL1Q9UK58 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC26.17■■□□□ 1.78
CCNL1Q9UK58 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC26.17■■□□□ 1.78
CCNL1Q9UK58 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
CCNL1Q9UK58 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC26.17■■□□□ 1.78
CCNL1Q9UK58 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC26.17■■□□□ 1.78
CCNL1Q9UK58 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC26.17■■□□□ 1.78
CCNL1Q9UK58 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
CCNL1Q9UK58 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC26.17■■□□□ 1.78
CCNL1Q9UK58 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC26.17■■□□□ 1.78
CCNL1Q9UK58 FDX2-207ENST00000494368 584 ntTSL 4 BASIC26.17■■□□□ 1.78
CCNL1Q9UK58 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC26.17■■□□□ 1.78
CCNL1Q9UK58 NME3-204ENST00000563498 920 ntTSL 2 BASIC26.17■■□□□ 1.78
CCNL1Q9UK58 AC073195.1-201ENST00000607241 877 ntBASIC26.17■■□□□ 1.78
CCNL1Q9UK58 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC26.17■■□□□ 1.78
CCNL1Q9UK58 NBPF21P-201ENST00000425093 1451 ntBASIC26.17■■□□□ 1.78
CCNL1Q9UK58 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC26.16■■□□□ 1.78
CCNL1Q9UK58 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC26.16■■□□□ 1.78
CCNL1Q9UK58 CCND3-203ENST00000372991 2085 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
CCNL1Q9UK58 AC127496.7-201ENST00000625110 1798 ntBASIC26.16■■□□□ 1.78
CCNL1Q9UK58 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
CCNL1Q9UK58 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC26.16■■□□□ 1.78
CCNL1Q9UK58 AC113347.1-201ENST00000413321 391 ntBASIC26.16■■□□□ 1.78
CCNL1Q9UK58 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC26.16■■□□□ 1.78
CCNL1Q9UK58 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC26.16■■□□□ 1.78
CCNL1Q9UK58 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
CCNL1Q9UK58 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
CCNL1Q9UK58 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC26.15■■□□□ 1.78
CCNL1Q9UK58 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC26.15■■□□□ 1.78
CCNL1Q9UK58 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC26.15■■□□□ 1.78
CCNL1Q9UK58 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC26.15■■□□□ 1.78
CCNL1Q9UK58 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC26.15■■□□□ 1.78
CCNL1Q9UK58 REXO1L10P-201ENST00000615707 1290 ntBASIC26.15■■□□□ 1.78
CCNL1Q9UK58 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC26.15■■□□□ 1.78
CCNL1Q9UK58 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC26.15■■□□□ 1.78
CCNL1Q9UK58 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC26.15■■□□□ 1.78
CCNL1Q9UK58 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC26.14■■□□□ 1.78
CCNL1Q9UK58 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC26.14■■□□□ 1.78
Retrieved 100 of 98,524 protein–RNA pairs in 16.7 ms