Protein–RNA interactions for Protein: Q9P2I0

CPSF2, Cleavage and polyadenylation specificity factor subunit 2, humanhuman

Known RBP Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF2Q9P2I0 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC20.48■□□□□ 0.87
CPSF2Q9P2I0 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
CPSF2Q9P2I0 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
CPSF2Q9P2I0 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CPSF2Q9P2I0 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC20.48■□□□□ 0.87
CPSF2Q9P2I0 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC20.48■□□□□ 0.87
CPSF2Q9P2I0 AC087289.5-201ENST00000586076 3175 ntBASIC20.48■□□□□ 0.87
CPSF2Q9P2I0 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC20.48■□□□□ 0.87
CPSF2Q9P2I0 FP700111.2-201ENST00000619190 1892 ntBASIC20.47■□□□□ 0.87
CPSF2Q9P2I0 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC20.47■□□□□ 0.87
CPSF2Q9P2I0 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC20.47■□□□□ 0.87
CPSF2Q9P2I0 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC20.47■□□□□ 0.87
CPSF2Q9P2I0 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC20.47■□□□□ 0.87
CPSF2Q9P2I0 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC20.47■□□□□ 0.87
CPSF2Q9P2I0 AC012414.1-201ENST00000556676 535 ntBASIC20.47■□□□□ 0.87
CPSF2Q9P2I0 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC20.47■□□□□ 0.87
CPSF2Q9P2I0 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CPSF2Q9P2I0 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CPSF2Q9P2I0 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CPSF2Q9P2I0 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CPSF2Q9P2I0 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CPSF2Q9P2I0 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CPSF2Q9P2I0 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CPSF2Q9P2I0 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
CPSF2Q9P2I0 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CPSF2Q9P2I0 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
CPSF2Q9P2I0 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
CPSF2Q9P2I0 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
CPSF2Q9P2I0 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
CPSF2Q9P2I0 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
CPSF2Q9P2I0 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
CPSF2Q9P2I0 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC20.46■□□□□ 0.87
CPSF2Q9P2I0 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CPSF2Q9P2I0 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC20.46■□□□□ 0.87
CPSF2Q9P2I0 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC20.46■□□□□ 0.87
CPSF2Q9P2I0 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC20.46■□□□□ 0.87
CPSF2Q9P2I0 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CPSF2Q9P2I0 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC20.46■□□□□ 0.87
CPSF2Q9P2I0 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CPSF2Q9P2I0 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CPSF2Q9P2I0 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CPSF2Q9P2I0 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CPSF2Q9P2I0 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC20.46■□□□□ 0.87
CPSF2Q9P2I0 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC20.46■□□□□ 0.87
CPSF2Q9P2I0 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
CPSF2Q9P2I0 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
CPSF2Q9P2I0 AC061975.6-201ENST00000579045 1553 ntBASIC20.46■□□□□ 0.87
CPSF2Q9P2I0 BID-203ENST00000399765 1879 ntTSL 2 BASIC20.45■□□□□ 0.86
CPSF2Q9P2I0 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC20.45■□□□□ 0.86
CPSF2Q9P2I0 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.86
CPSF2Q9P2I0 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC20.45■□□□□ 0.86
CPSF2Q9P2I0 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC20.45■□□□□ 0.86
CPSF2Q9P2I0 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CPSF2Q9P2I0 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.86
CPSF2Q9P2I0 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC20.45■□□□□ 0.86
CPSF2Q9P2I0 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CPSF2Q9P2I0 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
CPSF2Q9P2I0 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CPSF2Q9P2I0 NT5C3AP1-201ENST00000394500 1012 ntBASIC20.45■□□□□ 0.86
CPSF2Q9P2I0 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC20.45■□□□□ 0.86
CPSF2Q9P2I0 SUDS3P1-201ENST00000505831 966 ntBASIC20.45■□□□□ 0.86
CPSF2Q9P2I0 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC20.45■□□□□ 0.86
CPSF2Q9P2I0 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC20.45■□□□□ 0.86
CPSF2Q9P2I0 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
CPSF2Q9P2I0 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CPSF2Q9P2I0 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CPSF2Q9P2I0 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
CPSF2Q9P2I0 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC20.45■□□□□ 0.86
CPSF2Q9P2I0 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC20.45■□□□□ 0.86
CPSF2Q9P2I0 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
CPSF2Q9P2I0 AC020907.5-201ENST00000624372 1936 ntBASIC20.45■□□□□ 0.86
CPSF2Q9P2I0 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CPSF2Q9P2I0 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CPSF2Q9P2I0 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
CPSF2Q9P2I0 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC20.44■□□□□ 0.86
CPSF2Q9P2I0 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CPSF2Q9P2I0 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
CPSF2Q9P2I0 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CPSF2Q9P2I0 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CPSF2Q9P2I0 EEF1DP3-203ENST00000566025 782 ntBASIC20.44■□□□□ 0.86
CPSF2Q9P2I0 RALB-208ENST00000631312 311 ntTSL 5 BASIC20.44■□□□□ 0.86
CPSF2Q9P2I0 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC20.44■□□□□ 0.86
CPSF2Q9P2I0 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC20.44■□□□□ 0.86
CPSF2Q9P2I0 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CPSF2Q9P2I0 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CPSF2Q9P2I0 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
CPSF2Q9P2I0 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC20.44■□□□□ 0.86
CPSF2Q9P2I0 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CPSF2Q9P2I0 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CPSF2Q9P2I0 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC20.44■□□□□ 0.86
CPSF2Q9P2I0 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CPSF2Q9P2I0 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC20.43■□□□□ 0.86
CPSF2Q9P2I0 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC20.43■□□□□ 0.86
CPSF2Q9P2I0 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC20.43■□□□□ 0.86
CPSF2Q9P2I0 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
CPSF2Q9P2I0 MFF-207ENST00000409565 1548 ntTSL 2 BASIC20.43■□□□□ 0.86
CPSF2Q9P2I0 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
CPSF2Q9P2I0 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
CPSF2Q9P2I0 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
CPSF2Q9P2I0 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 44.3 ms