Protein–RNA interactions for Protein: Q9P218

COL20A1, Collagen alpha-1(XX) chain, humanhuman

Predictions only

Length 1,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1Q9P218 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC23.22■■□□□ 1.31
COL20A1Q9P218 AC121338.2-201ENST00000622535 1744 ntBASIC23.22■■□□□ 1.31
COL20A1Q9P218 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC23.22■■□□□ 1.31
COL20A1Q9P218 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
COL20A1Q9P218 AC026310.3-201ENST00000625186 2373 ntBASIC23.21■■□□□ 1.31
COL20A1Q9P218 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
COL20A1Q9P218 AC093827.2-201ENST00000512654 315 ntBASIC23.21■■□□□ 1.31
COL20A1Q9P218 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC23.21■■□□□ 1.31
COL20A1Q9P218 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC23.21■■□□□ 1.31
COL20A1Q9P218 MIR2861-201ENST00000636310 90 ntBASIC23.21■■□□□ 1.31
COL20A1Q9P218 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC23.21■■□□□ 1.31
COL20A1Q9P218 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC23.21■■□□□ 1.31
COL20A1Q9P218 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC23.21■■□□□ 1.31
COL20A1Q9P218 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC23.21■■□□□ 1.31
COL20A1Q9P218 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
COL20A1Q9P218 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC23.21■■□□□ 1.31
COL20A1Q9P218 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC23.21■■□□□ 1.31
COL20A1Q9P218 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
COL20A1Q9P218 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC23.2■■□□□ 1.3
COL20A1Q9P218 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC23.2■■□□□ 1.3
COL20A1Q9P218 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC23.2■■□□□ 1.3
COL20A1Q9P218 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC23.2■■□□□ 1.3
COL20A1Q9P218 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC23.2■■□□□ 1.3
COL20A1Q9P218 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC23.2■■□□□ 1.3
COL20A1Q9P218 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
COL20A1Q9P218 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
COL20A1Q9P218 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
COL20A1Q9P218 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
COL20A1Q9P218 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
COL20A1Q9P218 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC23.2■■□□□ 1.3
COL20A1Q9P218 AL158047.1-201ENST00000445918 881 ntBASIC23.2■■□□□ 1.3
COL20A1Q9P218 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC23.2■■□□□ 1.3
COL20A1Q9P218 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
COL20A1Q9P218 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC23.2■■□□□ 1.3
COL20A1Q9P218 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC23.2■■□□□ 1.3
COL20A1Q9P218 BRWD1-AS2-201ENST00000603064 1028 ntBASIC23.2■■□□□ 1.3
COL20A1Q9P218 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC23.2■■□□□ 1.3
COL20A1Q9P218 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC23.2■■□□□ 1.3
COL20A1Q9P218 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
COL20A1Q9P218 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC23.19■■□□□ 1.3
COL20A1Q9P218 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
COL20A1Q9P218 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC23.19■■□□□ 1.3
COL20A1Q9P218 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC23.19■■□□□ 1.3
COL20A1Q9P218 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC23.19■■□□□ 1.3
COL20A1Q9P218 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
COL20A1Q9P218 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
COL20A1Q9P218 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC23.19■■□□□ 1.3
COL20A1Q9P218 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC23.19■■□□□ 1.3
COL20A1Q9P218 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC23.19■■□□□ 1.3
COL20A1Q9P218 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC23.19■■□□□ 1.3
COL20A1Q9P218 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC23.19■■□□□ 1.3
COL20A1Q9P218 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC23.19■■□□□ 1.3
COL20A1Q9P218 AC142381.4-202ENST00000563973 229 ntBASIC23.19■■□□□ 1.3
COL20A1Q9P218 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC23.19■■□□□ 1.3
COL20A1Q9P218 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC23.19■■□□□ 1.3
COL20A1Q9P218 PLK5-205ENST00000642079 1969 ntBASIC23.19■■□□□ 1.3
COL20A1Q9P218 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC23.19■■□□□ 1.3
COL20A1Q9P218 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
COL20A1Q9P218 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
COL20A1Q9P218 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC23.19■■□□□ 1.3
COL20A1Q9P218 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
COL20A1Q9P218 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC23.18■■□□□ 1.3
COL20A1Q9P218 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC23.18■■□□□ 1.3
COL20A1Q9P218 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC23.18■■□□□ 1.3
COL20A1Q9P218 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
COL20A1Q9P218 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC23.18■■□□□ 1.3
COL20A1Q9P218 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
COL20A1Q9P218 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
COL20A1Q9P218 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
COL20A1Q9P218 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC23.18■■□□□ 1.3
COL20A1Q9P218 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC23.18■■□□□ 1.3
COL20A1Q9P218 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC23.18■■□□□ 1.3
COL20A1Q9P218 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC23.18■■□□□ 1.3
COL20A1Q9P218 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC23.18■■□□□ 1.3
COL20A1Q9P218 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
COL20A1Q9P218 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC23.18■■□□□ 1.3
COL20A1Q9P218 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
COL20A1Q9P218 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
COL20A1Q9P218 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
COL20A1Q9P218 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
COL20A1Q9P218 MOK-233ENST00000524214 1539 ntTSL 2 BASIC23.18■■□□□ 1.3
COL20A1Q9P218 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
COL20A1Q9P218 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
COL20A1Q9P218 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
COL20A1Q9P218 KRT8P36-201ENST00000489121 1440 ntBASIC23.17■■□□□ 1.3
COL20A1Q9P218 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
COL20A1Q9P218 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC23.17■■□□□ 1.3
COL20A1Q9P218 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC23.17■■□□□ 1.3
COL20A1Q9P218 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC23.17■■□□□ 1.3
COL20A1Q9P218 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC23.17■■□□□ 1.3
COL20A1Q9P218 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
COL20A1Q9P218 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC23.17■■□□□ 1.3
COL20A1Q9P218 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC23.17■■□□□ 1.3
COL20A1Q9P218 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC23.17■■□□□ 1.3
COL20A1Q9P218 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
COL20A1Q9P218 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC23.17■■□□□ 1.3
COL20A1Q9P218 AC079834.2-201ENST00000609776 1949 ntBASIC23.17■■□□□ 1.3
COL20A1Q9P218 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
COL20A1Q9P218 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
COL20A1Q9P218 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
Retrieved 100 of 98,524 protein–RNA pairs in 33.8 ms