Protein–RNA interactions for Protein: Q9NWS1

PARPBP, PCNA-interacting partner, humanhuman

Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PARPBPQ9NWS1 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC18.23■□□□□ 0.51
PARPBPQ9NWS1 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
PARPBPQ9NWS1 AC083906.2-201ENST00000511578 360 ntBASIC18.23■□□□□ 0.51
PARPBPQ9NWS1 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC18.23■□□□□ 0.51
PARPBPQ9NWS1 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
PARPBPQ9NWS1 AC105036.2-201ENST00000569468 176 ntBASIC18.23■□□□□ 0.51
PARPBPQ9NWS1 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
PARPBPQ9NWS1 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC18.23■□□□□ 0.51
PARPBPQ9NWS1 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC18.23■□□□□ 0.51
PARPBPQ9NWS1 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
PARPBPQ9NWS1 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC18.23■□□□□ 0.51
PARPBPQ9NWS1 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC18.23■□□□□ 0.51
PARPBPQ9NWS1 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC18.22■□□□□ 0.51
PARPBPQ9NWS1 AF106564.1-201ENST00000607058 2553 ntBASIC18.22■□□□□ 0.51
PARPBPQ9NWS1 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
PARPBPQ9NWS1 STAC-204ENST00000457375 1366 ntTSL 2 BASIC18.22■□□□□ 0.51
PARPBPQ9NWS1 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC18.22■□□□□ 0.51
PARPBPQ9NWS1 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
PARPBPQ9NWS1 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC18.22■□□□□ 0.51
PARPBPQ9NWS1 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
PARPBPQ9NWS1 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
PARPBPQ9NWS1 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC18.22■□□□□ 0.51
PARPBPQ9NWS1 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC18.22■□□□□ 0.51
PARPBPQ9NWS1 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC18.22■□□□□ 0.51
PARPBPQ9NWS1 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
PARPBPQ9NWS1 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
PARPBPQ9NWS1 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
PARPBPQ9NWS1 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
PARPBPQ9NWS1 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
PARPBPQ9NWS1 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
PARPBPQ9NWS1 MCRIP2P1-201ENST00000394346 511 ntBASIC18.21■□□□□ 0.51
PARPBPQ9NWS1 SLC29A4P1-201ENST00000398760 971 ntBASIC18.21■□□□□ 0.51
PARPBPQ9NWS1 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
PARPBPQ9NWS1 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC18.21■□□□□ 0.51
PARPBPQ9NWS1 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC18.21■□□□□ 0.51
PARPBPQ9NWS1 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC18.21■□□□□ 0.51
PARPBPQ9NWS1 GXYLT1P5-201ENST00000614548 1189 ntBASIC18.21■□□□□ 0.51
PARPBPQ9NWS1 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC18.21■□□□□ 0.51
PARPBPQ9NWS1 AL050303.2-201ENST00000619798 666 ntBASIC18.21■□□□□ 0.51
PARPBPQ9NWS1 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC18.21■□□□□ 0.51
PARPBPQ9NWS1 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC18.21■□□□□ 0.51
PARPBPQ9NWS1 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
PARPBPQ9NWS1 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
PARPBPQ9NWS1 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
PARPBPQ9NWS1 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.5
PARPBPQ9NWS1 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC18.2■□□□□ 0.5
PARPBPQ9NWS1 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
PARPBPQ9NWS1 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
PARPBPQ9NWS1 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC18.2■□□□□ 0.5
PARPBPQ9NWS1 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
PARPBPQ9NWS1 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
PARPBPQ9NWS1 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
PARPBPQ9NWS1 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC18.2■□□□□ 0.5
PARPBPQ9NWS1 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
PARPBPQ9NWS1 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
PARPBPQ9NWS1 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
PARPBPQ9NWS1 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
PARPBPQ9NWS1 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC18.2■□□□□ 0.5
PARPBPQ9NWS1 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
PARPBPQ9NWS1 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
PARPBPQ9NWS1 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
PARPBPQ9NWS1 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
PARPBPQ9NWS1 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
PARPBPQ9NWS1 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC18.2■□□□□ 0.5
PARPBPQ9NWS1 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
PARPBPQ9NWS1 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
PARPBPQ9NWS1 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
PARPBPQ9NWS1 MKRN4P-201ENST00000444706 1521 ntBASIC18.19■□□□□ 0.5
PARPBPQ9NWS1 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
PARPBPQ9NWS1 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
PARPBPQ9NWS1 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
PARPBPQ9NWS1 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
PARPBPQ9NWS1 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC18.19■□□□□ 0.5
PARPBPQ9NWS1 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
PARPBPQ9NWS1 METTL15-202ENST00000403099 795 ntTSL 5 BASIC18.19■□□□□ 0.5
PARPBPQ9NWS1 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC18.19■□□□□ 0.5
PARPBPQ9NWS1 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC18.19■□□□□ 0.5
PARPBPQ9NWS1 ERF-202ENST00000440177 2032 ntTSL 2 BASIC18.19■□□□□ 0.5
PARPBPQ9NWS1 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC18.19■□□□□ 0.5
PARPBPQ9NWS1 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC18.19■□□□□ 0.5
PARPBPQ9NWS1 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC18.19■□□□□ 0.5
PARPBPQ9NWS1 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
PARPBPQ9NWS1 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC18.19■□□□□ 0.5
PARPBPQ9NWS1 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC18.19■□□□□ 0.5
PARPBPQ9NWS1 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
PARPBPQ9NWS1 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC18.19■□□□□ 0.5
PARPBPQ9NWS1 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC18.19■□□□□ 0.5
PARPBPQ9NWS1 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
PARPBPQ9NWS1 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
PARPBPQ9NWS1 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
PARPBPQ9NWS1 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC18.18■□□□□ 0.5
PARPBPQ9NWS1 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC18.18■□□□□ 0.5
PARPBPQ9NWS1 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
PARPBPQ9NWS1 AC010980.2-201ENST00000587099 1412 ntBASIC18.18■□□□□ 0.5
PARPBPQ9NWS1 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
PARPBPQ9NWS1 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC18.18■□□□□ 0.5
PARPBPQ9NWS1 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
PARPBPQ9NWS1 MAP2K4P1-201ENST00000438453 1195 ntBASIC18.18■□□□□ 0.5
PARPBPQ9NWS1 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC18.18■□□□□ 0.5
PARPBPQ9NWS1 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 23 ms