Protein–RNA interactions for Protein: Q9NRR5

UBQLN4, Ubiquilin-4, humanhuman

Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN4Q9NRR5 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC18.78■□□□□ 0.6
UBQLN4Q9NRR5 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC18.78■□□□□ 0.6
UBQLN4Q9NRR5 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
UBQLN4Q9NRR5 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
UBQLN4Q9NRR5 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC18.78■□□□□ 0.6
UBQLN4Q9NRR5 CYP21A1P-202ENST00000354927 1481 ntBASIC18.77■□□□□ 0.6
UBQLN4Q9NRR5 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
UBQLN4Q9NRR5 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
UBQLN4Q9NRR5 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
UBQLN4Q9NRR5 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC18.77■□□□□ 0.6
UBQLN4Q9NRR5 AL121603.2-201ENST00000557373 2117 ntBASIC18.77■□□□□ 0.6
UBQLN4Q9NRR5 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC18.77■□□□□ 0.6
UBQLN4Q9NRR5 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
UBQLN4Q9NRR5 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC18.77■□□□□ 0.6
UBQLN4Q9NRR5 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
UBQLN4Q9NRR5 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC18.77■□□□□ 0.6
UBQLN4Q9NRR5 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
UBQLN4Q9NRR5 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
UBQLN4Q9NRR5 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
UBQLN4Q9NRR5 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
UBQLN4Q9NRR5 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC18.77■□□□□ 0.6
UBQLN4Q9NRR5 AC026185.1-201ENST00000445748 174 ntBASIC18.77■□□□□ 0.6
UBQLN4Q9NRR5 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
UBQLN4Q9NRR5 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
UBQLN4Q9NRR5 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
UBQLN4Q9NRR5 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
UBQLN4Q9NRR5 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
UBQLN4Q9NRR5 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
UBQLN4Q9NRR5 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC18.77■□□□□ 0.59
UBQLN4Q9NRR5 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC18.77■□□□□ 0.59
UBQLN4Q9NRR5 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
UBQLN4Q9NRR5 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC18.76■□□□□ 0.59
UBQLN4Q9NRR5 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
UBQLN4Q9NRR5 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
UBQLN4Q9NRR5 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
UBQLN4Q9NRR5 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
UBQLN4Q9NRR5 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
UBQLN4Q9NRR5 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC18.76■□□□□ 0.59
UBQLN4Q9NRR5 AC087633.2-202ENST00000565166 1439 ntBASIC18.76■□□□□ 0.59
UBQLN4Q9NRR5 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
UBQLN4Q9NRR5 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
UBQLN4Q9NRR5 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
UBQLN4Q9NRR5 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
UBQLN4Q9NRR5 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
UBQLN4Q9NRR5 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC18.76■□□□□ 0.59
UBQLN4Q9NRR5 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC18.76■□□□□ 0.59
UBQLN4Q9NRR5 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
UBQLN4Q9NRR5 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
UBQLN4Q9NRR5 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC18.76■□□□□ 0.59
UBQLN4Q9NRR5 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
UBQLN4Q9NRR5 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC18.76■□□□□ 0.59
UBQLN4Q9NRR5 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
UBQLN4Q9NRR5 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
UBQLN4Q9NRR5 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC18.75■□□□□ 0.59
UBQLN4Q9NRR5 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
UBQLN4Q9NRR5 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
UBQLN4Q9NRR5 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
UBQLN4Q9NRR5 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
UBQLN4Q9NRR5 MCRIP2P1-201ENST00000394346 511 ntBASIC18.75■□□□□ 0.59
UBQLN4Q9NRR5 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC18.75■□□□□ 0.59
UBQLN4Q9NRR5 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC18.75■□□□□ 0.59
UBQLN4Q9NRR5 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC18.75■□□□□ 0.59
UBQLN4Q9NRR5 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC18.75■□□□□ 0.59
UBQLN4Q9NRR5 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC18.75■□□□□ 0.59
UBQLN4Q9NRR5 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC18.75■□□□□ 0.59
UBQLN4Q9NRR5 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
UBQLN4Q9NRR5 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
UBQLN4Q9NRR5 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC18.75■□□□□ 0.59
UBQLN4Q9NRR5 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC18.75■□□□□ 0.59
UBQLN4Q9NRR5 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC18.75■□□□□ 0.59
UBQLN4Q9NRR5 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
UBQLN4Q9NRR5 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
UBQLN4Q9NRR5 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC18.75■□□□□ 0.59
UBQLN4Q9NRR5 AP005212.1-201ENST00000581547 1997 ntBASIC18.75■□□□□ 0.59
UBQLN4Q9NRR5 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC18.74■□□□□ 0.59
UBQLN4Q9NRR5 KRT8P36-201ENST00000489121 1440 ntBASIC18.74■□□□□ 0.59
UBQLN4Q9NRR5 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
UBQLN4Q9NRR5 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
UBQLN4Q9NRR5 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
UBQLN4Q9NRR5 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
UBQLN4Q9NRR5 AC073314.1-201ENST00000568729 2216 ntBASIC18.74■□□□□ 0.59
UBQLN4Q9NRR5 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
UBQLN4Q9NRR5 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC18.74■□□□□ 0.59
UBQLN4Q9NRR5 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
UBQLN4Q9NRR5 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
UBQLN4Q9NRR5 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
UBQLN4Q9NRR5 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
UBQLN4Q9NRR5 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC18.74■□□□□ 0.59
UBQLN4Q9NRR5 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
UBQLN4Q9NRR5 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC18.74■□□□□ 0.59
UBQLN4Q9NRR5 RAP2CP1-201ENST00000605103 478 ntBASIC18.74■□□□□ 0.59
UBQLN4Q9NRR5 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC18.74■□□□□ 0.59
UBQLN4Q9NRR5 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
UBQLN4Q9NRR5 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
UBQLN4Q9NRR5 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC18.74■□□□□ 0.59
UBQLN4Q9NRR5 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC18.74■□□□□ 0.59
UBQLN4Q9NRR5 AL157384.1-201ENST00000445995 2473 ntBASIC18.74■□□□□ 0.59
UBQLN4Q9NRR5 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
UBQLN4Q9NRR5 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC18.73■□□□□ 0.59
UBQLN4Q9NRR5 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 26.6 ms