Protein–RNA interactions for Protein: Q9NRQ5

SMCO4, Single-pass membrane and coiled-coil domain-containing protein 4, humanhuman

Predictions only

Length 59 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4Q9NRQ5 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
SMCO4Q9NRQ5 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
SMCO4Q9NRQ5 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
SMCO4Q9NRQ5 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
SMCO4Q9NRQ5 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SMCO4Q9NRQ5 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SMCO4Q9NRQ5 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC16.07■□□□□ 0.16
SMCO4Q9NRQ5 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SMCO4Q9NRQ5 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SMCO4Q9NRQ5 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SMCO4Q9NRQ5 S100A10-202ENST00000368811 1202 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SMCO4Q9NRQ5 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
SMCO4Q9NRQ5 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
SMCO4Q9NRQ5 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC16.07■□□□□ 0.16
SMCO4Q9NRQ5 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC16.07■□□□□ 0.16
SMCO4Q9NRQ5 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC16.07■□□□□ 0.16
SMCO4Q9NRQ5 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
SMCO4Q9NRQ5 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SMCO4Q9NRQ5 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
SMCO4Q9NRQ5 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC16.07■□□□□ 0.16
SMCO4Q9NRQ5 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC16.07■□□□□ 0.16
SMCO4Q9NRQ5 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SMCO4Q9NRQ5 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
SMCO4Q9NRQ5 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SMCO4Q9NRQ5 AL390961.4-201ENST00000623958 2535 ntBASIC16.06■□□□□ 0.16
SMCO4Q9NRQ5 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
SMCO4Q9NRQ5 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
SMCO4Q9NRQ5 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
SMCO4Q9NRQ5 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC16.06■□□□□ 0.16
SMCO4Q9NRQ5 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC16.06■□□□□ 0.16
SMCO4Q9NRQ5 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SMCO4Q9NRQ5 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
SMCO4Q9NRQ5 UBALD2-203ENST00000589240 660 ntTSL 2 BASIC16.06■□□□□ 0.16
SMCO4Q9NRQ5 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC16.06■□□□□ 0.16
SMCO4Q9NRQ5 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC16.06■□□□□ 0.16
SMCO4Q9NRQ5 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SMCO4Q9NRQ5 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
SMCO4Q9NRQ5 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
SMCO4Q9NRQ5 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC16.05■□□□□ 0.16
SMCO4Q9NRQ5 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC16.05■□□□□ 0.16
SMCO4Q9NRQ5 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
SMCO4Q9NRQ5 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SMCO4Q9NRQ5 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SMCO4Q9NRQ5 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC16.05■□□□□ 0.16
SMCO4Q9NRQ5 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SMCO4Q9NRQ5 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC16.05■□□□□ 0.16
SMCO4Q9NRQ5 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SMCO4Q9NRQ5 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC16.05■□□□□ 0.16
SMCO4Q9NRQ5 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SMCO4Q9NRQ5 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
SMCO4Q9NRQ5 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SMCO4Q9NRQ5 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC16.05■□□□□ 0.16
SMCO4Q9NRQ5 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SMCO4Q9NRQ5 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC16.05■□□□□ 0.16
SMCO4Q9NRQ5 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
SMCO4Q9NRQ5 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
SMCO4Q9NRQ5 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SMCO4Q9NRQ5 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SMCO4Q9NRQ5 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
SMCO4Q9NRQ5 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SMCO4Q9NRQ5 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SMCO4Q9NRQ5 PWWP2AP1-201ENST00000429776 2273 ntBASIC16.05■□□□□ 0.16
SMCO4Q9NRQ5 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SMCO4Q9NRQ5 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC16.04■□□□□ 0.16
SMCO4Q9NRQ5 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC16.04■□□□□ 0.16
SMCO4Q9NRQ5 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC16.04■□□□□ 0.16
SMCO4Q9NRQ5 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
SMCO4Q9NRQ5 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC16.04■□□□□ 0.16
SMCO4Q9NRQ5 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC16.04■□□□□ 0.16
SMCO4Q9NRQ5 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
SMCO4Q9NRQ5 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC16.04■□□□□ 0.16
SMCO4Q9NRQ5 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
SMCO4Q9NRQ5 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
SMCO4Q9NRQ5 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
SMCO4Q9NRQ5 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
SMCO4Q9NRQ5 LINC01529-204ENST00000636474 1715 ntBASIC16.04■□□□□ 0.16
SMCO4Q9NRQ5 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SMCO4Q9NRQ5 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
SMCO4Q9NRQ5 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
SMCO4Q9NRQ5 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
SMCO4Q9NRQ5 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SMCO4Q9NRQ5 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
SMCO4Q9NRQ5 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC16.04■□□□□ 0.16
SMCO4Q9NRQ5 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SMCO4Q9NRQ5 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
SMCO4Q9NRQ5 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
SMCO4Q9NRQ5 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
SMCO4Q9NRQ5 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC16.03■□□□□ 0.16
SMCO4Q9NRQ5 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
SMCO4Q9NRQ5 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
SMCO4Q9NRQ5 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC16.03■□□□□ 0.16
SMCO4Q9NRQ5 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC16.03■□□□□ 0.16
SMCO4Q9NRQ5 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
SMCO4Q9NRQ5 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC16.03■□□□□ 0.16
SMCO4Q9NRQ5 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
SMCO4Q9NRQ5 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC16.03■□□□□ 0.16
SMCO4Q9NRQ5 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
SMCO4Q9NRQ5 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC16.03■□□□□ 0.16
SMCO4Q9NRQ5 AC009086.3-201ENST00000623486 1008 ntBASIC16.03■□□□□ 0.16
SMCO4Q9NRQ5 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 27.1 ms