Protein–RNA interactions for Protein: Q9NR81

ARHGEF3, Rho guanine nucleotide exchange factor 3, humanhuman

Predictions only

Length 526 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF3Q9NR81 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC21.53■■□□□ 1.04
ARHGEF3Q9NR81 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC21.53■■□□□ 1.04
ARHGEF3Q9NR81 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC21.53■■□□□ 1.04
ARHGEF3Q9NR81 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
ARHGEF3Q9NR81 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC21.53■■□□□ 1.04
ARHGEF3Q9NR81 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC21.53■■□□□ 1.04
ARHGEF3Q9NR81 NME6-213ENST00000451657 871 ntTSL 2 BASIC21.53■■□□□ 1.04
ARHGEF3Q9NR81 MIR4497-201ENST00000583208 89 ntBASIC21.53■■□□□ 1.04
ARHGEF3Q9NR81 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC21.53■■□□□ 1.04
ARHGEF3Q9NR81 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC21.53■■□□□ 1.04
ARHGEF3Q9NR81 AC073912.3-201ENST00000624414 853 ntBASIC21.53■■□□□ 1.04
ARHGEF3Q9NR81 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
ARHGEF3Q9NR81 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
ARHGEF3Q9NR81 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
ARHGEF3Q9NR81 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC21.52■■□□□ 1.04
ARHGEF3Q9NR81 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
ARHGEF3Q9NR81 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC21.52■■□□□ 1.04
ARHGEF3Q9NR81 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
ARHGEF3Q9NR81 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
ARHGEF3Q9NR81 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
ARHGEF3Q9NR81 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
ARHGEF3Q9NR81 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
ARHGEF3Q9NR81 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC21.52■■□□□ 1.04
ARHGEF3Q9NR81 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC21.52■■□□□ 1.04
ARHGEF3Q9NR81 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC21.52■■□□□ 1.04
ARHGEF3Q9NR81 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC21.52■■□□□ 1.04
ARHGEF3Q9NR81 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC21.52■■□□□ 1.04
ARHGEF3Q9NR81 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC21.52■■□□□ 1.04
ARHGEF3Q9NR81 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
ARHGEF3Q9NR81 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC21.52■■□□□ 1.04
ARHGEF3Q9NR81 HLA-B-256ENST00000639848 1089 ntBASIC21.52■■□□□ 1.04
ARHGEF3Q9NR81 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC21.52■■□□□ 1.04
ARHGEF3Q9NR81 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC21.52■■□□□ 1.03
ARHGEF3Q9NR81 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC21.52■■□□□ 1.03
ARHGEF3Q9NR81 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.03
ARHGEF3Q9NR81 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
ARHGEF3Q9NR81 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC21.51■■□□□ 1.03
ARHGEF3Q9NR81 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
ARHGEF3Q9NR81 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC21.51■■□□□ 1.03
ARHGEF3Q9NR81 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
ARHGEF3Q9NR81 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC21.51■■□□□ 1.03
ARHGEF3Q9NR81 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC21.51■■□□□ 1.03
ARHGEF3Q9NR81 AL355472.2-201ENST00000422958 438 ntBASIC21.51■■□□□ 1.03
ARHGEF3Q9NR81 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC21.51■■□□□ 1.03
ARHGEF3Q9NR81 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC21.51■■□□□ 1.03
ARHGEF3Q9NR81 RPPH1-201ENST00000516869 333 ntBASIC21.51■■□□□ 1.03
ARHGEF3Q9NR81 C1QBPP2-201ENST00000528754 825 ntBASIC21.51■■□□□ 1.03
ARHGEF3Q9NR81 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC21.51■■□□□ 1.03
ARHGEF3Q9NR81 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
ARHGEF3Q9NR81 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
ARHGEF3Q9NR81 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
ARHGEF3Q9NR81 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC21.51■■□□□ 1.03
ARHGEF3Q9NR81 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
ARHGEF3Q9NR81 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
ARHGEF3Q9NR81 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC21.51■■□□□ 1.03
ARHGEF3Q9NR81 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
ARHGEF3Q9NR81 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
ARHGEF3Q9NR81 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
ARHGEF3Q9NR81 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
ARHGEF3Q9NR81 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
ARHGEF3Q9NR81 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
ARHGEF3Q9NR81 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC21.5■■□□□ 1.03
ARHGEF3Q9NR81 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
ARHGEF3Q9NR81 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
ARHGEF3Q9NR81 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
ARHGEF3Q9NR81 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC21.5■■□□□ 1.03
ARHGEF3Q9NR81 ECEL1P3-201ENST00000427961 737 ntBASIC21.5■■□□□ 1.03
ARHGEF3Q9NR81 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC21.5■■□□□ 1.03
ARHGEF3Q9NR81 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC21.5■■□□□ 1.03
ARHGEF3Q9NR81 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC21.5■■□□□ 1.03
ARHGEF3Q9NR81 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC21.5■■□□□ 1.03
ARHGEF3Q9NR81 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC21.5■■□□□ 1.03
ARHGEF3Q9NR81 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC21.5■■□□□ 1.03
ARHGEF3Q9NR81 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
ARHGEF3Q9NR81 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC21.5■■□□□ 1.03
ARHGEF3Q9NR81 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC21.5■■□□□ 1.03
ARHGEF3Q9NR81 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
ARHGEF3Q9NR81 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
ARHGEF3Q9NR81 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
ARHGEF3Q9NR81 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC21.49■■□□□ 1.03
ARHGEF3Q9NR81 AC061975.6-201ENST00000579045 1553 ntBASIC21.49■■□□□ 1.03
ARHGEF3Q9NR81 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
ARHGEF3Q9NR81 RARG-204ENST00000543726 1779 ntTSL 2 BASIC21.49■■□□□ 1.03
ARHGEF3Q9NR81 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC21.49■■□□□ 1.03
ARHGEF3Q9NR81 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
ARHGEF3Q9NR81 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
ARHGEF3Q9NR81 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
ARHGEF3Q9NR81 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC21.49■■□□□ 1.03
ARHGEF3Q9NR81 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC21.49■■□□□ 1.03
ARHGEF3Q9NR81 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
ARHGEF3Q9NR81 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
ARHGEF3Q9NR81 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
ARHGEF3Q9NR81 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC21.49■■□□□ 1.03
ARHGEF3Q9NR81 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC21.48■■□□□ 1.03
ARHGEF3Q9NR81 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
ARHGEF3Q9NR81 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
ARHGEF3Q9NR81 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC21.48■■□□□ 1.03
ARHGEF3Q9NR81 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
ARHGEF3Q9NR81 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC21.48■■□□□ 1.03
ARHGEF3Q9NR81 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC21.48■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 41.7 ms