Protein–RNA interactions for Protein: Q9NQV7

PRDM9, Histone-lysine N-methyltransferase PRDM9, humanhuman

Predictions only

Length 894 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM9Q9NQV7 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC19.28■□□□□ 0.68
PRDM9Q9NQV7 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
PRDM9Q9NQV7 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
PRDM9Q9NQV7 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
PRDM9Q9NQV7 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
PRDM9Q9NQV7 ME2-216ENST00000639850 2331 ntTSL 5 BASIC19.28■□□□□ 0.68
PRDM9Q9NQV7 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
PRDM9Q9NQV7 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
PRDM9Q9NQV7 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
PRDM9Q9NQV7 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC19.28■□□□□ 0.68
PRDM9Q9NQV7 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC19.28■□□□□ 0.68
PRDM9Q9NQV7 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC19.28■□□□□ 0.68
PRDM9Q9NQV7 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC19.28■□□□□ 0.68
PRDM9Q9NQV7 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC19.28■□□□□ 0.68
PRDM9Q9NQV7 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC19.28■□□□□ 0.68
PRDM9Q9NQV7 GAMT-205ENST00000640762 751 ntTSL 5 BASIC19.28■□□□□ 0.68
PRDM9Q9NQV7 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
PRDM9Q9NQV7 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
PRDM9Q9NQV7 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
PRDM9Q9NQV7 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
PRDM9Q9NQV7 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC19.27■□□□□ 0.68
PRDM9Q9NQV7 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
PRDM9Q9NQV7 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
PRDM9Q9NQV7 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC19.27■□□□□ 0.68
PRDM9Q9NQV7 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC19.27■□□□□ 0.68
PRDM9Q9NQV7 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
PRDM9Q9NQV7 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC19.27■□□□□ 0.68
PRDM9Q9NQV7 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
PRDM9Q9NQV7 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
PRDM9Q9NQV7 AL355802.2-201ENST00000402069 882 ntBASIC19.27■□□□□ 0.68
PRDM9Q9NQV7 MIPEPP3-201ENST00000412105 444 ntBASIC19.27■□□□□ 0.68
PRDM9Q9NQV7 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC19.27■□□□□ 0.68
PRDM9Q9NQV7 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC19.27■□□□□ 0.68
PRDM9Q9NQV7 CYP2T3P-201ENST00000601990 817 ntBASIC19.27■□□□□ 0.68
PRDM9Q9NQV7 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC19.27■□□□□ 0.68
PRDM9Q9NQV7 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
PRDM9Q9NQV7 CYP21A1P-202ENST00000354927 1481 ntBASIC19.27■□□□□ 0.67
PRDM9Q9NQV7 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
PRDM9Q9NQV7 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
PRDM9Q9NQV7 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
PRDM9Q9NQV7 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PRDM9Q9NQV7 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC19.26■□□□□ 0.67
PRDM9Q9NQV7 AC087633.2-202ENST00000565166 1439 ntBASIC19.26■□□□□ 0.67
PRDM9Q9NQV7 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
PRDM9Q9NQV7 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
PRDM9Q9NQV7 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC19.26■□□□□ 0.67
PRDM9Q9NQV7 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC19.26■□□□□ 0.67
PRDM9Q9NQV7 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC19.26■□□□□ 0.67
PRDM9Q9NQV7 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC19.26■□□□□ 0.67
PRDM9Q9NQV7 BX276092.2-201ENST00000417668 665 ntBASIC19.26■□□□□ 0.67
PRDM9Q9NQV7 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
PRDM9Q9NQV7 AC142086.2-201ENST00000569753 217 ntBASIC19.26■□□□□ 0.67
PRDM9Q9NQV7 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
PRDM9Q9NQV7 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
PRDM9Q9NQV7 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PRDM9Q9NQV7 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PRDM9Q9NQV7 KRT8P36-201ENST00000489121 1440 ntBASIC19.25■□□□□ 0.67
PRDM9Q9NQV7 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PRDM9Q9NQV7 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PRDM9Q9NQV7 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
PRDM9Q9NQV7 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
PRDM9Q9NQV7 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
PRDM9Q9NQV7 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC19.25■□□□□ 0.67
PRDM9Q9NQV7 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PRDM9Q9NQV7 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
PRDM9Q9NQV7 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC19.25■□□□□ 0.67
PRDM9Q9NQV7 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PRDM9Q9NQV7 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC19.25■□□□□ 0.67
PRDM9Q9NQV7 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PRDM9Q9NQV7 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
PRDM9Q9NQV7 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
PRDM9Q9NQV7 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PRDM9Q9NQV7 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC19.25■□□□□ 0.67
PRDM9Q9NQV7 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC19.25■□□□□ 0.67
PRDM9Q9NQV7 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC19.25■□□□□ 0.67
PRDM9Q9NQV7 MIR4758-201ENST00000577688 71 ntBASIC19.25■□□□□ 0.67
PRDM9Q9NQV7 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC19.25■□□□□ 0.67
PRDM9Q9NQV7 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
PRDM9Q9NQV7 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
PRDM9Q9NQV7 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
PRDM9Q9NQV7 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PRDM9Q9NQV7 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC19.25■□□□□ 0.67
PRDM9Q9NQV7 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
PRDM9Q9NQV7 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PRDM9Q9NQV7 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC19.25■□□□□ 0.67
PRDM9Q9NQV7 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC19.25■□□□□ 0.67
PRDM9Q9NQV7 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC19.25■□□□□ 0.67
PRDM9Q9NQV7 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
PRDM9Q9NQV7 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
PRDM9Q9NQV7 GABARAPL3-202ENST00000624044 1851 ntBASIC19.24■□□□□ 0.67
PRDM9Q9NQV7 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
PRDM9Q9NQV7 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
PRDM9Q9NQV7 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
PRDM9Q9NQV7 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PRDM9Q9NQV7 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
PRDM9Q9NQV7 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC19.24■□□□□ 0.67
PRDM9Q9NQV7 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PRDM9Q9NQV7 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
PRDM9Q9NQV7 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
PRDM9Q9NQV7 AL355472.2-201ENST00000422958 438 ntBASIC19.24■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 18 ms