Protein–RNA interactions for Protein: Q9NQS3

NECTIN3, Nectin-3, humanhuman

Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN3Q9NQS3 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC19.52■□□□□ 0.72
NECTIN3Q9NQS3 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
NECTIN3Q9NQS3 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC19.52■□□□□ 0.72
NECTIN3Q9NQS3 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC19.52■□□□□ 0.72
NECTIN3Q9NQS3 PLLP-204ENST00000569059 665 ntTSL 3 BASIC19.52■□□□□ 0.72
NECTIN3Q9NQS3 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC19.52■□□□□ 0.72
NECTIN3Q9NQS3 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
NECTIN3Q9NQS3 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
NECTIN3Q9NQS3 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC19.52■□□□□ 0.72
NECTIN3Q9NQS3 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC19.52■□□□□ 0.72
NECTIN3Q9NQS3 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC19.52■□□□□ 0.72
NECTIN3Q9NQS3 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC19.52■□□□□ 0.71
NECTIN3Q9NQS3 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.71
NECTIN3Q9NQS3 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
NECTIN3Q9NQS3 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
NECTIN3Q9NQS3 AC068338.2-201ENST00000563278 1430 ntBASIC19.51■□□□□ 0.71
NECTIN3Q9NQS3 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
NECTIN3Q9NQS3 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
NECTIN3Q9NQS3 MIR663A-201ENST00000385250 93 ntBASIC19.51■□□□□ 0.71
NECTIN3Q9NQS3 AC007322.4-201ENST00000509611 723 ntBASIC19.51■□□□□ 0.71
NECTIN3Q9NQS3 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
NECTIN3Q9NQS3 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC19.51■□□□□ 0.71
NECTIN3Q9NQS3 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC19.51■□□□□ 0.71
NECTIN3Q9NQS3 AC005181.1-201ENST00000604782 1256 ntBASIC19.51■□□□□ 0.71
NECTIN3Q9NQS3 AL050303.2-201ENST00000619798 666 ntBASIC19.51■□□□□ 0.71
NECTIN3Q9NQS3 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC19.51■□□□□ 0.71
NECTIN3Q9NQS3 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
NECTIN3Q9NQS3 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC19.51■□□□□ 0.71
NECTIN3Q9NQS3 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC19.51■□□□□ 0.71
NECTIN3Q9NQS3 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
NECTIN3Q9NQS3 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
NECTIN3Q9NQS3 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
NECTIN3Q9NQS3 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC19.5■□□□□ 0.71
NECTIN3Q9NQS3 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
NECTIN3Q9NQS3 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
NECTIN3Q9NQS3 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
NECTIN3Q9NQS3 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC19.5■□□□□ 0.71
NECTIN3Q9NQS3 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC19.5■□□□□ 0.71
NECTIN3Q9NQS3 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
NECTIN3Q9NQS3 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
NECTIN3Q9NQS3 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
NECTIN3Q9NQS3 AC091799.1-201ENST00000422823 811 ntBASIC19.5■□□□□ 0.71
NECTIN3Q9NQS3 PPP1R14BP3-201ENST00000509033 445 ntBASIC19.5■□□□□ 0.71
NECTIN3Q9NQS3 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC19.5■□□□□ 0.71
NECTIN3Q9NQS3 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
NECTIN3Q9NQS3 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
NECTIN3Q9NQS3 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC19.5■□□□□ 0.71
NECTIN3Q9NQS3 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
NECTIN3Q9NQS3 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
NECTIN3Q9NQS3 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
NECTIN3Q9NQS3 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
NECTIN3Q9NQS3 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC19.49■□□□□ 0.71
NECTIN3Q9NQS3 PARN-205ENST00000539279 1557 ntTSL 2 BASIC19.49■□□□□ 0.71
NECTIN3Q9NQS3 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
NECTIN3Q9NQS3 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
NECTIN3Q9NQS3 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
NECTIN3Q9NQS3 APTR-203ENST00000430801 583 ntTSL 5 BASIC19.49■□□□□ 0.71
NECTIN3Q9NQS3 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC19.49■□□□□ 0.71
NECTIN3Q9NQS3 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
NECTIN3Q9NQS3 TK2-208ENST00000545043 1120 ntTSL 2 BASIC19.49■□□□□ 0.71
NECTIN3Q9NQS3 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC19.49■□□□□ 0.71
NECTIN3Q9NQS3 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
NECTIN3Q9NQS3 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC19.49■□□□□ 0.71
NECTIN3Q9NQS3 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC19.49■□□□□ 0.71
NECTIN3Q9NQS3 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
NECTIN3Q9NQS3 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
NECTIN3Q9NQS3 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
NECTIN3Q9NQS3 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC19.49■□□□□ 0.71
NECTIN3Q9NQS3 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
NECTIN3Q9NQS3 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
NECTIN3Q9NQS3 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
NECTIN3Q9NQS3 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
NECTIN3Q9NQS3 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC19.49■□□□□ 0.71
NECTIN3Q9NQS3 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
NECTIN3Q9NQS3 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC19.48■□□□□ 0.71
NECTIN3Q9NQS3 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC19.48■□□□□ 0.71
NECTIN3Q9NQS3 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
NECTIN3Q9NQS3 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC19.48■□□□□ 0.71
NECTIN3Q9NQS3 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC19.48■□□□□ 0.71
NECTIN3Q9NQS3 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC19.48■□□□□ 0.71
NECTIN3Q9NQS3 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
NECTIN3Q9NQS3 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
NECTIN3Q9NQS3 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC19.48■□□□□ 0.71
NECTIN3Q9NQS3 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
NECTIN3Q9NQS3 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
NECTIN3Q9NQS3 AC006970.2-201ENST00000450065 779 ntBASIC19.48■□□□□ 0.71
NECTIN3Q9NQS3 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
NECTIN3Q9NQS3 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC19.48■□□□□ 0.71
NECTIN3Q9NQS3 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC19.48■□□□□ 0.71
NECTIN3Q9NQS3 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
NECTIN3Q9NQS3 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC19.48■□□□□ 0.71
NECTIN3Q9NQS3 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC19.48■□□□□ 0.71
NECTIN3Q9NQS3 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC19.48■□□□□ 0.71
NECTIN3Q9NQS3 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
NECTIN3Q9NQS3 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
NECTIN3Q9NQS3 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
NECTIN3Q9NQS3 AL391422.3-201ENST00000603791 2761 ntBASIC19.48■□□□□ 0.71
NECTIN3Q9NQS3 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
NECTIN3Q9NQS3 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
NECTIN3Q9NQS3 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC19.47■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 54.4 ms