Protein–RNA interactions for Protein: Q9H8M2

BRD9, Bromodomain-containing protein 9, humanhuman

Predictions only

Length 597 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRD9Q9H8M2 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
BRD9Q9H8M2 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
BRD9Q9H8M2 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
BRD9Q9H8M2 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC21.14■□□□□ 0.97
BRD9Q9H8M2 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.97
BRD9Q9H8M2 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
BRD9Q9H8M2 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
BRD9Q9H8M2 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
BRD9Q9H8M2 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC21.14■□□□□ 0.97
BRD9Q9H8M2 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
BRD9Q9H8M2 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC21.13■□□□□ 0.97
BRD9Q9H8M2 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
BRD9Q9H8M2 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
BRD9Q9H8M2 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC21.13■□□□□ 0.97
BRD9Q9H8M2 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC21.13■□□□□ 0.97
BRD9Q9H8M2 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
BRD9Q9H8M2 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC21.13■□□□□ 0.97
BRD9Q9H8M2 AC211429.1-201ENST00000415277 523 ntBASIC21.13■□□□□ 0.97
BRD9Q9H8M2 AC012618.2-201ENST00000428058 849 ntBASIC21.13■□□□□ 0.97
BRD9Q9H8M2 THEM4-205ENST00000489410 643 ntTSL 2 BASIC21.13■□□□□ 0.97
BRD9Q9H8M2 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC21.13■□□□□ 0.97
BRD9Q9H8M2 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC21.13■□□□□ 0.97
BRD9Q9H8M2 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
BRD9Q9H8M2 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
BRD9Q9H8M2 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
BRD9Q9H8M2 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
BRD9Q9H8M2 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
BRD9Q9H8M2 AC087633.2-202ENST00000565166 1439 ntBASIC21.12■□□□□ 0.97
BRD9Q9H8M2 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
BRD9Q9H8M2 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
BRD9Q9H8M2 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
BRD9Q9H8M2 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC21.12■□□□□ 0.97
BRD9Q9H8M2 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
BRD9Q9H8M2 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC21.12■□□□□ 0.97
BRD9Q9H8M2 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC21.12■□□□□ 0.97
BRD9Q9H8M2 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC21.12■□□□□ 0.97
BRD9Q9H8M2 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC21.12■□□□□ 0.97
BRD9Q9H8M2 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
BRD9Q9H8M2 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC21.12■□□□□ 0.97
BRD9Q9H8M2 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
BRD9Q9H8M2 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC21.12■□□□□ 0.97
BRD9Q9H8M2 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
BRD9Q9H8M2 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC21.12■□□□□ 0.97
BRD9Q9H8M2 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
BRD9Q9H8M2 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC21.12■□□□□ 0.97
BRD9Q9H8M2 MTDHP1-201ENST00000605323 784 ntBASIC21.12■□□□□ 0.97
BRD9Q9H8M2 AL023875.1-201ENST00000640777 796 ntBASIC21.12■□□□□ 0.97
BRD9Q9H8M2 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
BRD9Q9H8M2 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC21.12■□□□□ 0.97
BRD9Q9H8M2 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC21.12■□□□□ 0.97
BRD9Q9H8M2 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC21.12■□□□□ 0.97
BRD9Q9H8M2 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
BRD9Q9H8M2 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC21.12■□□□□ 0.97
BRD9Q9H8M2 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
BRD9Q9H8M2 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC21.11■□□□□ 0.97
BRD9Q9H8M2 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
BRD9Q9H8M2 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC21.11■□□□□ 0.97
BRD9Q9H8M2 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
BRD9Q9H8M2 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC21.11■□□□□ 0.97
BRD9Q9H8M2 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
BRD9Q9H8M2 RPS2P55-201ENST00000397318 883 ntBASIC21.11■□□□□ 0.97
BRD9Q9H8M2 AC239809.2-201ENST00000415381 517 ntBASIC21.11■□□□□ 0.97
BRD9Q9H8M2 PGM5P4-201ENST00000421970 445 ntBASIC21.11■□□□□ 0.97
BRD9Q9H8M2 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC21.11■□□□□ 0.97
BRD9Q9H8M2 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC21.11■□□□□ 0.97
BRD9Q9H8M2 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
BRD9Q9H8M2 AC107956.1-201ENST00000494359 873 ntBASIC21.11■□□□□ 0.97
BRD9Q9H8M2 LY6E-205ENST00000519611 635 ntTSL 3 BASIC21.11■□□□□ 0.97
BRD9Q9H8M2 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC21.11■□□□□ 0.97
BRD9Q9H8M2 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC21.11■□□□□ 0.97
BRD9Q9H8M2 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC21.11■□□□□ 0.97
BRD9Q9H8M2 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC21.11■□□□□ 0.97
BRD9Q9H8M2 AC233702.5-201ENST00000584107 538 ntBASIC21.11■□□□□ 0.97
BRD9Q9H8M2 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC21.11■□□□□ 0.97
BRD9Q9H8M2 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC21.11■□□□□ 0.97
BRD9Q9H8M2 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC21.11■□□□□ 0.97
BRD9Q9H8M2 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC21.11■□□□□ 0.97
BRD9Q9H8M2 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC21.11■□□□□ 0.97
BRD9Q9H8M2 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC21.1■□□□□ 0.97
BRD9Q9H8M2 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
BRD9Q9H8M2 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
BRD9Q9H8M2 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
BRD9Q9H8M2 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
BRD9Q9H8M2 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
BRD9Q9H8M2 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
BRD9Q9H8M2 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
BRD9Q9H8M2 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
BRD9Q9H8M2 ABHD17AP6-201ENST00000458502 1044 ntBASIC21.1■□□□□ 0.97
BRD9Q9H8M2 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC21.1■□□□□ 0.97
BRD9Q9H8M2 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC21.1■□□□□ 0.97
BRD9Q9H8M2 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC21.1■□□□□ 0.97
BRD9Q9H8M2 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC21.1■□□□□ 0.97
BRD9Q9H8M2 BRWD1-AS2-201ENST00000603064 1028 ntBASIC21.1■□□□□ 0.97
BRD9Q9H8M2 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC21.1■□□□□ 0.97
BRD9Q9H8M2 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC21.1■□□□□ 0.97
BRD9Q9H8M2 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC21.1■□□□□ 0.97
BRD9Q9H8M2 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
BRD9Q9H8M2 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC21.1■□□□□ 0.97
BRD9Q9H8M2 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC21.1■□□□□ 0.97
BRD9Q9H8M2 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC21.1■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 18.1 ms