Protein–RNA interactions for Protein: Q9H7L9

SUDS3, Sin3 histone deacetylase corepressor complex component SDS3, humanhuman

Predicted RBP Predictions only

Length 328 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUDS3Q9H7L9 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC20.79■□□□□ 0.92
SUDS3Q9H7L9 MDK-213ENST00000617138 635 ntTSL 2 BASIC20.79■□□□□ 0.92
SUDS3Q9H7L9 AC120498.10-201ENST00000621827 505 ntBASIC20.79■□□□□ 0.92
SUDS3Q9H7L9 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC20.79■□□□□ 0.92
SUDS3Q9H7L9 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
SUDS3Q9H7L9 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
SUDS3Q9H7L9 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
SUDS3Q9H7L9 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC20.78■□□□□ 0.92
SUDS3Q9H7L9 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SUDS3Q9H7L9 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
SUDS3Q9H7L9 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
SUDS3Q9H7L9 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
SUDS3Q9H7L9 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
SUDS3Q9H7L9 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SUDS3Q9H7L9 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC20.78■□□□□ 0.92
SUDS3Q9H7L9 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
SUDS3Q9H7L9 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
SUDS3Q9H7L9 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
SUDS3Q9H7L9 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC20.78■□□□□ 0.92
SUDS3Q9H7L9 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SUDS3Q9H7L9 AC007322.1-201ENST00000426983 750 ntBASIC20.78■□□□□ 0.92
SUDS3Q9H7L9 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
SUDS3Q9H7L9 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC20.78■□□□□ 0.92
SUDS3Q9H7L9 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC20.78■□□□□ 0.92
SUDS3Q9H7L9 AC010536.3-201ENST00000620306 533 ntBASIC20.78■□□□□ 0.92
SUDS3Q9H7L9 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SUDS3Q9H7L9 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SUDS3Q9H7L9 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC20.78■□□□□ 0.92
SUDS3Q9H7L9 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
SUDS3Q9H7L9 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
SUDS3Q9H7L9 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
SUDS3Q9H7L9 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
SUDS3Q9H7L9 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
SUDS3Q9H7L9 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC20.77■□□□□ 0.92
SUDS3Q9H7L9 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC20.77■□□□□ 0.92
SUDS3Q9H7L9 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC20.77■□□□□ 0.92
SUDS3Q9H7L9 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
SUDS3Q9H7L9 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
SUDS3Q9H7L9 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
SUDS3Q9H7L9 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
SUDS3Q9H7L9 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
SUDS3Q9H7L9 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
SUDS3Q9H7L9 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
SUDS3Q9H7L9 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
SUDS3Q9H7L9 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC20.77■□□□□ 0.92
SUDS3Q9H7L9 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC20.77■□□□□ 0.92
SUDS3Q9H7L9 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC20.77■□□□□ 0.92
SUDS3Q9H7L9 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
SUDS3Q9H7L9 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC20.77■□□□□ 0.92
SUDS3Q9H7L9 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
SUDS3Q9H7L9 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
SUDS3Q9H7L9 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
SUDS3Q9H7L9 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
SUDS3Q9H7L9 AL158211.5-201ENST00000623583 2518 ntBASIC20.77■□□□□ 0.92
SUDS3Q9H7L9 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC20.77■□□□□ 0.91
SUDS3Q9H7L9 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
SUDS3Q9H7L9 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC20.76■□□□□ 0.91
SUDS3Q9H7L9 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SUDS3Q9H7L9 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
SUDS3Q9H7L9 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
SUDS3Q9H7L9 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC20.76■□□□□ 0.91
SUDS3Q9H7L9 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
SUDS3Q9H7L9 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SUDS3Q9H7L9 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
SUDS3Q9H7L9 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC20.76■□□□□ 0.91
SUDS3Q9H7L9 AC005181.1-201ENST00000604782 1256 ntBASIC20.76■□□□□ 0.91
SUDS3Q9H7L9 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC20.76■□□□□ 0.91
SUDS3Q9H7L9 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC20.76■□□□□ 0.91
SUDS3Q9H7L9 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
SUDS3Q9H7L9 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SUDS3Q9H7L9 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC20.76■□□□□ 0.91
SUDS3Q9H7L9 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC20.76■□□□□ 0.91
SUDS3Q9H7L9 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
SUDS3Q9H7L9 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC20.76■□□□□ 0.91
SUDS3Q9H7L9 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
SUDS3Q9H7L9 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
SUDS3Q9H7L9 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SUDS3Q9H7L9 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC20.75■□□□□ 0.91
SUDS3Q9H7L9 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
SUDS3Q9H7L9 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
SUDS3Q9H7L9 EXOC3-AS1-202ENST00000623673 1663 ntBASIC20.75■□□□□ 0.91
SUDS3Q9H7L9 MAP2K4P1-201ENST00000438453 1195 ntBASIC20.75■□□□□ 0.91
SUDS3Q9H7L9 KRT18P20-201ENST00000548986 1279 ntBASIC20.75■□□□□ 0.91
SUDS3Q9H7L9 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC20.75■□□□□ 0.91
SUDS3Q9H7L9 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SUDS3Q9H7L9 AC121338.2-201ENST00000622535 1744 ntBASIC20.75■□□□□ 0.91
SUDS3Q9H7L9 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
SUDS3Q9H7L9 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SUDS3Q9H7L9 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
SUDS3Q9H7L9 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
SUDS3Q9H7L9 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC20.75■□□□□ 0.91
SUDS3Q9H7L9 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
SUDS3Q9H7L9 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
SUDS3Q9H7L9 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
SUDS3Q9H7L9 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC20.74■□□□□ 0.91
SUDS3Q9H7L9 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SUDS3Q9H7L9 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC20.74■□□□□ 0.91
SUDS3Q9H7L9 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC20.74■□□□□ 0.91
SUDS3Q9H7L9 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SUDS3Q9H7L9 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 23.8 ms