Protein–RNA interactions for Protein: Q9H1E3

NUCKS1, Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1, humanhuman

Known RBP Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUCKS1Q9H1E3 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC22.11■■□□□ 1.13
NUCKS1Q9H1E3 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC22.11■■□□□ 1.13
NUCKS1Q9H1E3 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
NUCKS1Q9H1E3 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC22.1■■□□□ 1.13
NUCKS1Q9H1E3 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC22.1■■□□□ 1.13
NUCKS1Q9H1E3 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC22.1■■□□□ 1.13
NUCKS1Q9H1E3 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC22.1■■□□□ 1.13
NUCKS1Q9H1E3 NAA20-201ENST00000310450 920 ntTSL 2 BASIC22.1■■□□□ 1.13
NUCKS1Q9H1E3 GXYLT1P2-201ENST00000433312 1230 ntBASIC22.1■■□□□ 1.13
NUCKS1Q9H1E3 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC22.1■■□□□ 1.13
NUCKS1Q9H1E3 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC22.1■■□□□ 1.13
NUCKS1Q9H1E3 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC22.1■■□□□ 1.13
NUCKS1Q9H1E3 GALNS-213ENST00000569433 723 ntTSL 3 BASIC22.1■■□□□ 1.13
NUCKS1Q9H1E3 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
NUCKS1Q9H1E3 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC22.1■■□□□ 1.13
NUCKS1Q9H1E3 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
NUCKS1Q9H1E3 AC099778.1-201ENST00000568593 1911 ntBASIC22.1■■□□□ 1.13
NUCKS1Q9H1E3 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC22.1■■□□□ 1.13
NUCKS1Q9H1E3 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC22.09■■□□□ 1.13
NUCKS1Q9H1E3 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
NUCKS1Q9H1E3 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
NUCKS1Q9H1E3 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
NUCKS1Q9H1E3 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
NUCKS1Q9H1E3 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
NUCKS1Q9H1E3 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
NUCKS1Q9H1E3 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
NUCKS1Q9H1E3 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC22.09■■□□□ 1.13
NUCKS1Q9H1E3 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC22.09■■□□□ 1.13
NUCKS1Q9H1E3 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC22.09■■□□□ 1.13
NUCKS1Q9H1E3 MIR2861-201ENST00000636310 90 ntBASIC22.09■■□□□ 1.13
NUCKS1Q9H1E3 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
NUCKS1Q9H1E3 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
NUCKS1Q9H1E3 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
NUCKS1Q9H1E3 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC22.08■■□□□ 1.13
NUCKS1Q9H1E3 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC22.08■■□□□ 1.13
NUCKS1Q9H1E3 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC22.08■■□□□ 1.13
NUCKS1Q9H1E3 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC22.08■■□□□ 1.13
NUCKS1Q9H1E3 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
NUCKS1Q9H1E3 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC22.08■■□□□ 1.13
NUCKS1Q9H1E3 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
NUCKS1Q9H1E3 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
NUCKS1Q9H1E3 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC22.08■■□□□ 1.13
NUCKS1Q9H1E3 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC22.08■■□□□ 1.13
NUCKS1Q9H1E3 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC22.08■■□□□ 1.13
NUCKS1Q9H1E3 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC22.08■■□□□ 1.13
NUCKS1Q9H1E3 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC22.08■■□□□ 1.13
NUCKS1Q9H1E3 IKBKGP1-201ENST00000612193 1073 ntBASIC22.08■■□□□ 1.13
NUCKS1Q9H1E3 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
NUCKS1Q9H1E3 ME2-218ENST00000640965 2476 ntTSL 5 BASIC22.08■■□□□ 1.13
NUCKS1Q9H1E3 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
NUCKS1Q9H1E3 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC22.08■■□□□ 1.12
NUCKS1Q9H1E3 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.12
NUCKS1Q9H1E3 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.12
NUCKS1Q9H1E3 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC22.07■■□□□ 1.12
NUCKS1Q9H1E3 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC22.07■■□□□ 1.12
NUCKS1Q9H1E3 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC22.07■■□□□ 1.12
NUCKS1Q9H1E3 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC22.07■■□□□ 1.12
NUCKS1Q9H1E3 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
NUCKS1Q9H1E3 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC22.07■■□□□ 1.12
NUCKS1Q9H1E3 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC22.07■■□□□ 1.12
NUCKS1Q9H1E3 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC22.07■■□□□ 1.12
NUCKS1Q9H1E3 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC22.07■■□□□ 1.12
NUCKS1Q9H1E3 PTPA-214ENST00000423100 988 ntTSL 2 BASIC22.07■■□□□ 1.12
NUCKS1Q9H1E3 KRT18P20-201ENST00000548986 1279 ntBASIC22.07■■□□□ 1.12
NUCKS1Q9H1E3 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC22.07■■□□□ 1.12
NUCKS1Q9H1E3 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC22.07■■□□□ 1.12
NUCKS1Q9H1E3 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC22.07■■□□□ 1.12
NUCKS1Q9H1E3 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC22.07■■□□□ 1.12
NUCKS1Q9H1E3 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
NUCKS1Q9H1E3 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
NUCKS1Q9H1E3 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC22.07■■□□□ 1.12
NUCKS1Q9H1E3 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
NUCKS1Q9H1E3 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC22.06■■□□□ 1.12
NUCKS1Q9H1E3 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC22.06■■□□□ 1.12
NUCKS1Q9H1E3 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
NUCKS1Q9H1E3 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC22.06■■□□□ 1.12
NUCKS1Q9H1E3 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC22.06■■□□□ 1.12
NUCKS1Q9H1E3 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC22.06■■□□□ 1.12
NUCKS1Q9H1E3 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC22.06■■□□□ 1.12
NUCKS1Q9H1E3 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC22.06■■□□□ 1.12
NUCKS1Q9H1E3 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC22.06■■□□□ 1.12
NUCKS1Q9H1E3 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
NUCKS1Q9H1E3 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
NUCKS1Q9H1E3 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC22.06■■□□□ 1.12
NUCKS1Q9H1E3 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC22.06■■□□□ 1.12
NUCKS1Q9H1E3 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
NUCKS1Q9H1E3 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
NUCKS1Q9H1E3 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
NUCKS1Q9H1E3 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
NUCKS1Q9H1E3 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
NUCKS1Q9H1E3 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
NUCKS1Q9H1E3 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC22.05■■□□□ 1.12
NUCKS1Q9H1E3 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC22.05■■□□□ 1.12
NUCKS1Q9H1E3 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
NUCKS1Q9H1E3 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
NUCKS1Q9H1E3 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC22.05■■□□□ 1.12
NUCKS1Q9H1E3 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC22.05■■□□□ 1.12
NUCKS1Q9H1E3 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC22.05■■□□□ 1.12
NUCKS1Q9H1E3 TESC-206ENST00000541210 936 ntTSL 3 BASIC22.05■■□□□ 1.12
NUCKS1Q9H1E3 AC092437.1-201ENST00000624794 1048 ntBASIC22.05■■□□□ 1.12
Retrieved 100 of 98,524 protein–RNA pairs in 22.1 ms