Protein–RNA interactions for Protein: Q9BYQ3

KRTAP9-3, Keratin-associated protein 9-3, humanhuman

Predictions only

Length 159 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP9-3Q9BYQ3 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC9.38□□□□□ -0.91
KRTAP9-3Q9BYQ3 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC9.38□□□□□ -0.91
KRTAP9-3Q9BYQ3 AL139353.2-202ENST00000502430 1213 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
KRTAP9-3Q9BYQ3 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC9.38□□□□□ -0.91
KRTAP9-3Q9BYQ3 AC097110.1-201ENST00000507344 768 ntTSL 2 BASIC9.38□□□□□ -0.91
KRTAP9-3Q9BYQ3 AC090739.1-201ENST00000522190 708 ntTSL 3 BASIC9.38□□□□□ -0.91
KRTAP9-3Q9BYQ3 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC9.38□□□□□ -0.91
KRTAP9-3Q9BYQ3 TPM1-226ENST00000560959 925 ntTSL 2 BASIC9.38□□□□□ -0.91
KRTAP9-3Q9BYQ3 FOPNL-207ENST00000575073 530 ntTSL 2 BASIC9.38□□□□□ -0.91
KRTAP9-3Q9BYQ3 P4HB-223ENST00000576390 439 ntTSL 4 BASIC9.38□□□□□ -0.91
KRTAP9-3Q9BYQ3 AC060766.1-201ENST00000590824 627 ntBASIC9.38□□□□□ -0.91
KRTAP9-3Q9BYQ3 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
KRTAP9-3Q9BYQ3 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC9.38□□□□□ -0.91
KRTAP9-3Q9BYQ3 AC007386.2-202ENST00000622718 1018 ntTSL 3 BASIC9.38□□□□□ -0.91
KRTAP9-3Q9BYQ3 AL590326.2-201ENST00000625139 305 ntBASIC9.38□□□□□ -0.91
KRTAP9-3Q9BYQ3 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
KRTAP9-3Q9BYQ3 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
KRTAP9-3Q9BYQ3 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC9.38□□□□□ -0.91
KRTAP9-3Q9BYQ3 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
KRTAP9-3Q9BYQ3 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC9.38□□□□□ -0.91
KRTAP9-3Q9BYQ3 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC9.38□□□□□ -0.91
KRTAP9-3Q9BYQ3 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC9.38□□□□□ -0.91
KRTAP9-3Q9BYQ3 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
KRTAP9-3Q9BYQ3 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
KRTAP9-3Q9BYQ3 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC9.37□□□□□ -0.91
KRTAP9-3Q9BYQ3 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC9.37□□□□□ -0.91
KRTAP9-3Q9BYQ3 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC9.37□□□□□ -0.91
KRTAP9-3Q9BYQ3 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC9.37□□□□□ -0.91
KRTAP9-3Q9BYQ3 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC9.37□□□□□ -0.91
KRTAP9-3Q9BYQ3 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC9.37□□□□□ -0.91
KRTAP9-3Q9BYQ3 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC9.37□□□□□ -0.91
KRTAP9-3Q9BYQ3 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC9.37□□□□□ -0.91
KRTAP9-3Q9BYQ3 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
KRTAP9-3Q9BYQ3 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC9.37□□□□□ -0.91
KRTAP9-3Q9BYQ3 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
KRTAP9-3Q9BYQ3 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
KRTAP9-3Q9BYQ3 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
KRTAP9-3Q9BYQ3 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
KRTAP9-3Q9BYQ3 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC9.37□□□□□ -0.91
KRTAP9-3Q9BYQ3 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
KRTAP9-3Q9BYQ3 RER1-204ENST00000378518 522 ntTSL 3 BASIC9.37□□□□□ -0.91
KRTAP9-3Q9BYQ3 AL606534.3-201ENST00000437499 373 ntTSL 5 BASIC9.37□□□□□ -0.91
KRTAP9-3Q9BYQ3 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC9.37□□□□□ -0.91
KRTAP9-3Q9BYQ3 AL160408.1-203ENST00000453568 631 ntTSL 5 BASIC9.37□□□□□ -0.91
KRTAP9-3Q9BYQ3 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC9.37□□□□□ -0.91
KRTAP9-3Q9BYQ3 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
KRTAP9-3Q9BYQ3 AL049597.2-201ENST00000565575 961 ntBASIC9.37□□□□□ -0.91
KRTAP9-3Q9BYQ3 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC9.37□□□□□ -0.91
KRTAP9-3Q9BYQ3 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC9.37□□□□□ -0.91
KRTAP9-3Q9BYQ3 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
KRTAP9-3Q9BYQ3 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC9.37□□□□□ -0.91
KRTAP9-3Q9BYQ3 Six3os1_6.1-201ENST00000620790 196 ntBASIC9.37□□□□□ -0.91
KRTAP9-3Q9BYQ3 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC9.37□□□□□ -0.91
KRTAP9-3Q9BYQ3 AC027281.2-201ENST00000623856 713 ntBASIC9.37□□□□□ -0.91
KRTAP9-3Q9BYQ3 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC9.37□□□□□ -0.91
KRTAP9-3Q9BYQ3 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC9.37□□□□□ -0.91
KRTAP9-3Q9BYQ3 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC9.37□□□□□ -0.91
KRTAP9-3Q9BYQ3 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC9.37□□□□□ -0.91
KRTAP9-3Q9BYQ3 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC9.37□□□□□ -0.91
KRTAP9-3Q9BYQ3 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC9.37□□□□□ -0.91
KRTAP9-3Q9BYQ3 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC9.37□□□□□ -0.91
KRTAP9-3Q9BYQ3 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC9.37□□□□□ -0.91
KRTAP9-3Q9BYQ3 KRT8P9-201ENST00000558927 1449 ntBASIC9.37□□□□□ -0.91
KRTAP9-3Q9BYQ3 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
KRTAP9-3Q9BYQ3 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC9.37□□□□□ -0.91
KRTAP9-3Q9BYQ3 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC9.37□□□□□ -0.91
KRTAP9-3Q9BYQ3 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC9.37□□□□□ -0.91
KRTAP9-3Q9BYQ3 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC9.37□□□□□ -0.91
KRTAP9-3Q9BYQ3 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC9.37□□□□□ -0.91
KRTAP9-3Q9BYQ3 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC9.37□□□□□ -0.91
KRTAP9-3Q9BYQ3 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
KRTAP9-3Q9BYQ3 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
KRTAP9-3Q9BYQ3 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
KRTAP9-3Q9BYQ3 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
KRTAP9-3Q9BYQ3 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
KRTAP9-3Q9BYQ3 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
KRTAP9-3Q9BYQ3 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC9.36□□□□□ -0.91
KRTAP9-3Q9BYQ3 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC9.36□□□□□ -0.91
KRTAP9-3Q9BYQ3 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
KRTAP9-3Q9BYQ3 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC9.36□□□□□ -0.91
KRTAP9-3Q9BYQ3 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC9.36□□□□□ -0.91
KRTAP9-3Q9BYQ3 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC9.36□□□□□ -0.91
KRTAP9-3Q9BYQ3 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC9.36□□□□□ -0.91
KRTAP9-3Q9BYQ3 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
KRTAP9-3Q9BYQ3 AL355355.2-201ENST00000442321 338 ntBASIC9.36□□□□□ -0.91
KRTAP9-3Q9BYQ3 AL354994.1-201ENST00000445967 194 ntTSL 5 BASIC9.36□□□□□ -0.91
KRTAP9-3Q9BYQ3 HES2-206ENST00000489730 730 ntTSL 2 BASIC9.36□□□□□ -0.91
KRTAP9-3Q9BYQ3 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC9.36□□□□□ -0.91
KRTAP9-3Q9BYQ3 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC9.36□□□□□ -0.91
KRTAP9-3Q9BYQ3 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC9.36□□□□□ -0.91
KRTAP9-3Q9BYQ3 RN7SL440P-201ENST00000577855 343 ntBASIC9.36□□□□□ -0.91
KRTAP9-3Q9BYQ3 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC9.36□□□□□ -0.91
KRTAP9-3Q9BYQ3 AC107068.2-201ENST00000634611 447 ntTSL 2 BASIC9.36□□□□□ -0.91
KRTAP9-3Q9BYQ3 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC9.36□□□□□ -0.91
KRTAP9-3Q9BYQ3 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC9.36□□□□□ -0.91
KRTAP9-3Q9BYQ3 TNK2-201ENST00000333602 5270 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
KRTAP9-3Q9BYQ3 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC9.36□□□□□ -0.91
KRTAP9-3Q9BYQ3 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
KRTAP9-3Q9BYQ3 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
KRTAP9-3Q9BYQ3 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC9.35□□□□□ -0.91
Retrieved 100 of 98,524 protein–RNA pairs in 18.8 ms