Protein–RNA interactions for Protein: Q99985

SEMA3C, Semaphorin-3C, humanhuman

Predictions only

Length 751 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3CQ99985 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
SEMA3CQ99985 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SEMA3CQ99985 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC20.71■□□□□ 0.91
SEMA3CQ99985 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
SEMA3CQ99985 MCRIP2P1-201ENST00000394346 511 ntBASIC20.71■□□□□ 0.91
SEMA3CQ99985 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC20.71■□□□□ 0.91
SEMA3CQ99985 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC20.71■□□□□ 0.91
SEMA3CQ99985 AC083906.2-201ENST00000511578 360 ntBASIC20.71■□□□□ 0.91
SEMA3CQ99985 OAS3-207ENST00000551007 998 ntTSL 2 BASIC20.71■□□□□ 0.91
SEMA3CQ99985 AL121832.2-201ENST00000610979 668 ntBASIC20.71■□□□□ 0.91
SEMA3CQ99985 GXYLT1P5-201ENST00000614548 1189 ntBASIC20.71■□□□□ 0.91
SEMA3CQ99985 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC20.71■□□□□ 0.91
SEMA3CQ99985 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
SEMA3CQ99985 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SEMA3CQ99985 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC20.71■□□□□ 0.91
SEMA3CQ99985 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SEMA3CQ99985 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
SEMA3CQ99985 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
SEMA3CQ99985 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC20.71■□□□□ 0.91
SEMA3CQ99985 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
SEMA3CQ99985 AC087633.2-202ENST00000565166 1439 ntBASIC20.7■□□□□ 0.9
SEMA3CQ99985 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC20.7■□□□□ 0.9
SEMA3CQ99985 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
SEMA3CQ99985 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC20.7■□□□□ 0.9
SEMA3CQ99985 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC20.7■□□□□ 0.9
SEMA3CQ99985 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC20.7■□□□□ 0.9
SEMA3CQ99985 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SEMA3CQ99985 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC20.7■□□□□ 0.9
SEMA3CQ99985 AL355472.2-201ENST00000422958 438 ntBASIC20.7■□□□□ 0.9
SEMA3CQ99985 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC20.7■□□□□ 0.9
SEMA3CQ99985 NCF1B-203ENST00000435988 1254 ntBASIC20.7■□□□□ 0.9
SEMA3CQ99985 MAP2K4P1-201ENST00000438453 1195 ntBASIC20.7■□□□□ 0.9
SEMA3CQ99985 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC20.7■□□□□ 0.9
SEMA3CQ99985 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC20.7■□□□□ 0.9
SEMA3CQ99985 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC20.7■□□□□ 0.9
SEMA3CQ99985 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC20.7■□□□□ 0.9
SEMA3CQ99985 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC20.7■□□□□ 0.9
SEMA3CQ99985 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SEMA3CQ99985 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SEMA3CQ99985 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SEMA3CQ99985 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
SEMA3CQ99985 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC20.7■□□□□ 0.9
SEMA3CQ99985 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC20.69■□□□□ 0.9
SEMA3CQ99985 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
SEMA3CQ99985 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC20.69■□□□□ 0.9
SEMA3CQ99985 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
SEMA3CQ99985 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
SEMA3CQ99985 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
SEMA3CQ99985 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SEMA3CQ99985 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
SEMA3CQ99985 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SEMA3CQ99985 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
SEMA3CQ99985 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC20.69■□□□□ 0.9
SEMA3CQ99985 TMEM191A-211ENST00000637163 1067 ntBASIC20.69■□□□□ 0.9
SEMA3CQ99985 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC20.69■□□□□ 0.9
SEMA3CQ99985 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
SEMA3CQ99985 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
SEMA3CQ99985 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
SEMA3CQ99985 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC20.68■□□□□ 0.9
SEMA3CQ99985 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SEMA3CQ99985 MKRN4P-201ENST00000444706 1521 ntBASIC20.68■□□□□ 0.9
SEMA3CQ99985 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SEMA3CQ99985 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
SEMA3CQ99985 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SEMA3CQ99985 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SEMA3CQ99985 PGM5P4-201ENST00000421970 445 ntBASIC20.68■□□□□ 0.9
SEMA3CQ99985 PHB2-213ENST00000546111 858 ntTSL 2 BASIC20.68■□□□□ 0.9
SEMA3CQ99985 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
SEMA3CQ99985 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC20.68■□□□□ 0.9
SEMA3CQ99985 CYP2T3P-201ENST00000601990 817 ntBASIC20.68■□□□□ 0.9
SEMA3CQ99985 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
SEMA3CQ99985 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SEMA3CQ99985 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC20.68■□□□□ 0.9
SEMA3CQ99985 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
SEMA3CQ99985 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SEMA3CQ99985 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SEMA3CQ99985 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC20.68■□□□□ 0.9
SEMA3CQ99985 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SEMA3CQ99985 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC20.68■□□□□ 0.9
SEMA3CQ99985 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC20.68■□□□□ 0.9
SEMA3CQ99985 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
SEMA3CQ99985 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC20.67■□□□□ 0.9
SEMA3CQ99985 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
SEMA3CQ99985 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC20.67■□□□□ 0.9
SEMA3CQ99985 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SEMA3CQ99985 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SEMA3CQ99985 GPX1P1-201ENST00000388829 606 ntBASIC20.67■□□□□ 0.9
SEMA3CQ99985 KRT18P68-201ENST00000392293 1000 ntBASIC20.67■□□□□ 0.9
SEMA3CQ99985 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC20.67■□□□□ 0.9
SEMA3CQ99985 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SEMA3CQ99985 AL356652.1-201ENST00000615962 565 ntBASIC20.67■□□□□ 0.9
SEMA3CQ99985 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC20.67■□□□□ 0.9
SEMA3CQ99985 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
SEMA3CQ99985 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC20.67■□□□□ 0.9
SEMA3CQ99985 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
SEMA3CQ99985 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
SEMA3CQ99985 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SEMA3CQ99985 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SEMA3CQ99985 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC20.66■□□□□ 0.9
SEMA3CQ99985 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 20.5 ms