Protein–RNA interactions for Protein: Q99829

CPNE1, Copine-1, humanhuman

Predictions only

Length 537 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1Q99829 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.86
CPNE1Q99829 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC20.39■□□□□ 0.86
CPNE1Q99829 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
CPNE1Q99829 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.86
CPNE1Q99829 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
CPNE1Q99829 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.86
CPNE1Q99829 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.85
CPNE1Q99829 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC20.39■□□□□ 0.85
CPNE1Q99829 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
CPNE1Q99829 YBX1P1-201ENST00000445822 960 ntBASIC20.39■□□□□ 0.85
CPNE1Q99829 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
CPNE1Q99829 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CPNE1Q99829 BID-204ENST00000399767 2129 ntTSL 2 BASIC20.39■□□□□ 0.85
CPNE1Q99829 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CPNE1Q99829 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CPNE1Q99829 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC20.38■□□□□ 0.85
CPNE1Q99829 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CPNE1Q99829 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC20.38■□□□□ 0.85
CPNE1Q99829 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC20.38■□□□□ 0.85
CPNE1Q99829 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CPNE1Q99829 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
CPNE1Q99829 TCF3P1-201ENST00000423021 1937 ntBASIC20.38■□□□□ 0.85
CPNE1Q99829 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CPNE1Q99829 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC20.38■□□□□ 0.85
CPNE1Q99829 FGF8-207ENST00000618991 856 ntTSL 3 BASIC20.38■□□□□ 0.85
CPNE1Q99829 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CPNE1Q99829 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC20.38■□□□□ 0.85
CPNE1Q99829 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CPNE1Q99829 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
CPNE1Q99829 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
CPNE1Q99829 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CPNE1Q99829 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
CPNE1Q99829 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC20.37■□□□□ 0.85
CPNE1Q99829 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
CPNE1Q99829 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CPNE1Q99829 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CPNE1Q99829 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
CPNE1Q99829 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC20.37■□□□□ 0.85
CPNE1Q99829 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
CPNE1Q99829 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
CPNE1Q99829 COX20-201ENST00000366528 568 ntTSL 2 BASIC20.37■□□□□ 0.85
CPNE1Q99829 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CPNE1Q99829 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CPNE1Q99829 MIR638-201ENST00000385237 100 ntBASIC20.37■□□□□ 0.85
CPNE1Q99829 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
CPNE1Q99829 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CPNE1Q99829 AC091799.1-201ENST00000422823 811 ntBASIC20.37■□□□□ 0.85
CPNE1Q99829 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC20.37■□□□□ 0.85
CPNE1Q99829 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
CPNE1Q99829 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC20.37■□□□□ 0.85
CPNE1Q99829 SLC7A5P1-201ENST00000568957 537 ntBASIC20.37■□□□□ 0.85
CPNE1Q99829 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC20.37■□□□□ 0.85
CPNE1Q99829 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
CPNE1Q99829 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CPNE1Q99829 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CPNE1Q99829 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CPNE1Q99829 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
CPNE1Q99829 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC20.37■□□□□ 0.85
CPNE1Q99829 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CPNE1Q99829 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CPNE1Q99829 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
CPNE1Q99829 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
CPNE1Q99829 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
CPNE1Q99829 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
CPNE1Q99829 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC20.36■□□□□ 0.85
CPNE1Q99829 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC20.36■□□□□ 0.85
CPNE1Q99829 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CPNE1Q99829 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC20.36■□□□□ 0.85
CPNE1Q99829 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC20.36■□□□□ 0.85
CPNE1Q99829 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
CPNE1Q99829 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC20.36■□□□□ 0.85
CPNE1Q99829 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
CPNE1Q99829 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CPNE1Q99829 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC20.36■□□□□ 0.85
CPNE1Q99829 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC20.36■□□□□ 0.85
CPNE1Q99829 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC20.36■□□□□ 0.85
CPNE1Q99829 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
CPNE1Q99829 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
CPNE1Q99829 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
CPNE1Q99829 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
CPNE1Q99829 RBM17P2-201ENST00000616397 1405 ntBASIC20.36■□□□□ 0.85
CPNE1Q99829 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CPNE1Q99829 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CPNE1Q99829 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC20.35■□□□□ 0.85
CPNE1Q99829 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
CPNE1Q99829 AC007322.3-201ENST00000426526 701 ntBASIC20.35■□□□□ 0.85
CPNE1Q99829 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
CPNE1Q99829 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC20.35■□□□□ 0.85
CPNE1Q99829 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CPNE1Q99829 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CPNE1Q99829 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CPNE1Q99829 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC20.35■□□□□ 0.85
CPNE1Q99829 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CPNE1Q99829 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
CPNE1Q99829 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC20.34■□□□□ 0.85
CPNE1Q99829 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
CPNE1Q99829 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
CPNE1Q99829 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CPNE1Q99829 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
CPNE1Q99829 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC20.34■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms