Protein–RNA interactions for Protein: Q96PY6

NEK1, Serine/threonine-protein kinase Nek1, humanhuman

Predictions only

Length 1,258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1Q96PY6 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC24.18■■□□□ 1.46
NEK1Q96PY6 AC092720.2-201ENST00000602388 1665 ntBASIC24.18■■□□□ 1.46
NEK1Q96PY6 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC24.18■■□□□ 1.46
NEK1Q96PY6 AC073130.3-201ENST00000624389 2278 ntBASIC24.18■■□□□ 1.46
NEK1Q96PY6 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC24.18■■□□□ 1.46
NEK1Q96PY6 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
NEK1Q96PY6 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC24.18■■□□□ 1.46
NEK1Q96PY6 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
NEK1Q96PY6 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC24.18■■□□□ 1.46
NEK1Q96PY6 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC24.18■■□□□ 1.46
NEK1Q96PY6 PARP1-210ENST00000629232 477 ntTSL 5 BASIC24.18■■□□□ 1.46
NEK1Q96PY6 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC24.18■■□□□ 1.46
NEK1Q96PY6 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC24.18■■□□□ 1.46
NEK1Q96PY6 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
NEK1Q96PY6 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC24.18■■□□□ 1.46
NEK1Q96PY6 KRT8P36-201ENST00000489121 1440 ntBASIC24.18■■□□□ 1.46
NEK1Q96PY6 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC24.18■■□□□ 1.46
NEK1Q96PY6 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
NEK1Q96PY6 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
NEK1Q96PY6 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC24.17■■□□□ 1.46
NEK1Q96PY6 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC24.17■■□□□ 1.46
NEK1Q96PY6 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC24.17■■□□□ 1.46
NEK1Q96PY6 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC24.17■■□□□ 1.46
NEK1Q96PY6 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
NEK1Q96PY6 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
NEK1Q96PY6 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
NEK1Q96PY6 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC24.17■■□□□ 1.46
NEK1Q96PY6 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC24.17■■□□□ 1.46
NEK1Q96PY6 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC24.17■■□□□ 1.46
NEK1Q96PY6 AC004911.1-201ENST00000416316 871 ntBASIC24.17■■□□□ 1.46
NEK1Q96PY6 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC24.17■■□□□ 1.46
NEK1Q96PY6 RARRES2P4-201ENST00000514074 484 ntBASIC24.17■■□□□ 1.46
NEK1Q96PY6 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC24.17■■□□□ 1.46
NEK1Q96PY6 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
NEK1Q96PY6 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC24.17■■□□□ 1.46
NEK1Q96PY6 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC24.17■■□□□ 1.46
NEK1Q96PY6 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC24.17■■□□□ 1.46
NEK1Q96PY6 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC24.17■■□□□ 1.46
NEK1Q96PY6 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
NEK1Q96PY6 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC24.16■■□□□ 1.46
NEK1Q96PY6 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
NEK1Q96PY6 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC24.16■■□□□ 1.46
NEK1Q96PY6 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC24.16■■□□□ 1.46
NEK1Q96PY6 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC24.16■■□□□ 1.46
NEK1Q96PY6 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC24.16■■□□□ 1.46
NEK1Q96PY6 CYP21A1P-202ENST00000354927 1481 ntBASIC24.16■■□□□ 1.46
NEK1Q96PY6 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC24.16■■□□□ 1.46
NEK1Q96PY6 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC24.16■■□□□ 1.46
NEK1Q96PY6 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC24.16■■□□□ 1.46
NEK1Q96PY6 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC24.16■■□□□ 1.46
NEK1Q96PY6 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC24.16■■□□□ 1.46
NEK1Q96PY6 AC090192.1-201ENST00000517740 490 ntBASIC24.16■■□□□ 1.46
NEK1Q96PY6 MDK-213ENST00000617138 635 ntTSL 2 BASIC24.16■■□□□ 1.46
NEK1Q96PY6 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC24.16■■□□□ 1.46
NEK1Q96PY6 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
NEK1Q96PY6 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
NEK1Q96PY6 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
NEK1Q96PY6 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
NEK1Q96PY6 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC24.15■■□□□ 1.46
NEK1Q96PY6 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC24.15■■□□□ 1.46
NEK1Q96PY6 METTL26-203ENST00000397664 604 ntTSL 2 BASIC24.15■■□□□ 1.46
NEK1Q96PY6 AC007322.1-201ENST00000426983 750 ntBASIC24.15■■□□□ 1.46
NEK1Q96PY6 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC24.15■■□□□ 1.46
NEK1Q96PY6 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC24.15■■□□□ 1.46
NEK1Q96PY6 MAZ-216ENST00000616501 991 ntTSL 5 BASIC24.15■■□□□ 1.46
NEK1Q96PY6 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC24.15■■□□□ 1.46
NEK1Q96PY6 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC24.15■■□□□ 1.46
NEK1Q96PY6 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
NEK1Q96PY6 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC24.15■■□□□ 1.46
NEK1Q96PY6 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC24.15■■□□□ 1.46
NEK1Q96PY6 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC24.15■■□□□ 1.46
NEK1Q96PY6 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC24.15■■□□□ 1.46
NEK1Q96PY6 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
NEK1Q96PY6 AL512408.1-201ENST00000569378 2000 ntBASIC24.15■■□□□ 1.46
NEK1Q96PY6 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
NEK1Q96PY6 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC24.15■■□□□ 1.46
NEK1Q96PY6 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
NEK1Q96PY6 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC24.14■■□□□ 1.46
NEK1Q96PY6 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC24.14■■□□□ 1.46
NEK1Q96PY6 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC24.14■■□□□ 1.46
NEK1Q96PY6 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.46
NEK1Q96PY6 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.46
NEK1Q96PY6 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC24.14■■□□□ 1.46
NEK1Q96PY6 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC24.14■■□□□ 1.45
NEK1Q96PY6 APTR-203ENST00000430801 583 ntTSL 5 BASIC24.14■■□□□ 1.45
NEK1Q96PY6 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC24.14■■□□□ 1.45
NEK1Q96PY6 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC24.14■■□□□ 1.45
NEK1Q96PY6 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC24.14■■□□□ 1.45
NEK1Q96PY6 AC080038.1-201ENST00000611274 1154 ntBASIC24.14■■□□□ 1.45
NEK1Q96PY6 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC24.14■■□□□ 1.45
NEK1Q96PY6 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
NEK1Q96PY6 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
NEK1Q96PY6 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC24.14■■□□□ 1.45
NEK1Q96PY6 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC24.14■■□□□ 1.45
NEK1Q96PY6 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC24.14■■□□□ 1.45
NEK1Q96PY6 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
NEK1Q96PY6 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
NEK1Q96PY6 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC24.13■■□□□ 1.45
NEK1Q96PY6 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
NEK1Q96PY6 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC24.13■■□□□ 1.45
Retrieved 100 of 98,524 protein–RNA pairs in 24.8 ms