Protein–RNA interactions for Protein: Q96PB1

CASD1, N-acetylneuraminate 9-O-acetyltransferase, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASD1Q96PB1 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC21.93■■□□□ 1.1
CASD1Q96PB1 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC21.93■■□□□ 1.1
CASD1Q96PB1 AC011484.1-201ENST00000377652 1995 ntBASIC21.93■■□□□ 1.1
CASD1Q96PB1 AC239809.2-201ENST00000415381 517 ntBASIC21.93■■□□□ 1.1
CASD1Q96PB1 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
CASD1Q96PB1 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
CASD1Q96PB1 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC21.93■■□□□ 1.1
CASD1Q96PB1 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC21.93■■□□□ 1.1
CASD1Q96PB1 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC21.93■■□□□ 1.1
CASD1Q96PB1 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC21.93■■□□□ 1.1
CASD1Q96PB1 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC21.93■■□□□ 1.1
CASD1Q96PB1 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
CASD1Q96PB1 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC21.93■■□□□ 1.1
CASD1Q96PB1 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
CASD1Q96PB1 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC21.92■■□□□ 1.1
CASD1Q96PB1 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
CASD1Q96PB1 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
CASD1Q96PB1 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC21.92■■□□□ 1.1
CASD1Q96PB1 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC21.92■■□□□ 1.1
CASD1Q96PB1 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
CASD1Q96PB1 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC21.92■■□□□ 1.1
CASD1Q96PB1 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC21.92■■□□□ 1.1
CASD1Q96PB1 AC110285.5-201ENST00000611501 352 ntBASIC21.92■■□□□ 1.1
CASD1Q96PB1 AC073912.3-201ENST00000624414 853 ntBASIC21.92■■□□□ 1.1
CASD1Q96PB1 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC21.92■■□□□ 1.1
CASD1Q96PB1 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.1
CASD1Q96PB1 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC21.92■■□□□ 1.1
CASD1Q96PB1 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC21.91■■□□□ 1.1
CASD1Q96PB1 PARN-205ENST00000539279 1557 ntTSL 2 BASIC21.91■■□□□ 1.1
CASD1Q96PB1 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC21.91■■□□□ 1.1
CASD1Q96PB1 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC21.91■■□□□ 1.1
CASD1Q96PB1 KRASP1-201ENST00000407852 552 ntBASIC21.91■■□□□ 1.1
CASD1Q96PB1 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC21.91■■□□□ 1.1
CASD1Q96PB1 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
CASD1Q96PB1 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC21.91■■□□□ 1.1
CASD1Q96PB1 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC21.91■■□□□ 1.1
CASD1Q96PB1 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC21.91■■□□□ 1.1
CASD1Q96PB1 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC21.91■■□□□ 1.1
CASD1Q96PB1 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC21.91■■□□□ 1.1
CASD1Q96PB1 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
CASD1Q96PB1 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC21.91■■□□□ 1.1
CASD1Q96PB1 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC21.9■■□□□ 1.1
CASD1Q96PB1 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
CASD1Q96PB1 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
CASD1Q96PB1 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
CASD1Q96PB1 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
CASD1Q96PB1 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC21.9■■□□□ 1.1
CASD1Q96PB1 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
CASD1Q96PB1 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC21.9■■□□□ 1.1
CASD1Q96PB1 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC21.9■■□□□ 1.1
CASD1Q96PB1 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC21.9■■□□□ 1.1
CASD1Q96PB1 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC21.9■■□□□ 1.1
CASD1Q96PB1 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
CASD1Q96PB1 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
CASD1Q96PB1 STK25-205ENST00000405883 1904 ntTSL 2 BASIC21.9■■□□□ 1.1
CASD1Q96PB1 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC21.9■■□□□ 1.1
CASD1Q96PB1 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
CASD1Q96PB1 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC21.9■■□□□ 1.1
CASD1Q96PB1 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC21.89■■□□□ 1.1
CASD1Q96PB1 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC21.89■■□□□ 1.1
CASD1Q96PB1 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
CASD1Q96PB1 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
CASD1Q96PB1 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
CASD1Q96PB1 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC21.89■■□□□ 1.09
CASD1Q96PB1 TSPY7P-201ENST00000431358 1114 ntBASIC21.89■■□□□ 1.09
CASD1Q96PB1 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC21.89■■□□□ 1.09
CASD1Q96PB1 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC21.89■■□□□ 1.09
CASD1Q96PB1 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC21.89■■□□□ 1.09
CASD1Q96PB1 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC21.89■■□□□ 1.09
CASD1Q96PB1 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC21.89■■□□□ 1.09
CASD1Q96PB1 REXO1L12P-201ENST00000622156 912 ntBASIC21.89■■□□□ 1.09
CASD1Q96PB1 AC244015.2-201ENST00000616358 1861 ntBASIC21.89■■□□□ 1.09
CASD1Q96PB1 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
CASD1Q96PB1 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC21.89■■□□□ 1.09
CASD1Q96PB1 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
CASD1Q96PB1 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC21.88■■□□□ 1.09
CASD1Q96PB1 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
CASD1Q96PB1 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC21.88■■□□□ 1.09
CASD1Q96PB1 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC21.88■■□□□ 1.09
CASD1Q96PB1 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC21.88■■□□□ 1.09
CASD1Q96PB1 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
CASD1Q96PB1 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC21.88■■□□□ 1.09
CASD1Q96PB1 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
CASD1Q96PB1 ECEL1P3-201ENST00000427961 737 ntBASIC21.88■■□□□ 1.09
CASD1Q96PB1 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
CASD1Q96PB1 HES2-206ENST00000489730 730 ntTSL 2 BASIC21.88■■□□□ 1.09
CASD1Q96PB1 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC21.88■■□□□ 1.09
CASD1Q96PB1 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC21.88■■□□□ 1.09
CASD1Q96PB1 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC21.88■■□□□ 1.09
CASD1Q96PB1 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC21.88■■□□□ 1.09
CASD1Q96PB1 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC21.88■■□□□ 1.09
CASD1Q96PB1 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
CASD1Q96PB1 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
CASD1Q96PB1 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC21.88■■□□□ 1.09
CASD1Q96PB1 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC21.88■■□□□ 1.09
CASD1Q96PB1 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
CASD1Q96PB1 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC21.88■■□□□ 1.09
CASD1Q96PB1 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC21.88■■□□□ 1.09
CASD1Q96PB1 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
CASD1Q96PB1 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms