Protein–RNA interactions for Protein: Q96P44

COL21A1, Collagen alpha-1(XXI) chain, humanhuman

Predictions only

Length 957 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1Q96P44 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
COL21A1Q96P44 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
COL21A1Q96P44 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
COL21A1Q96P44 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
COL21A1Q96P44 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
COL21A1Q96P44 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
COL21A1Q96P44 AC007225.1-201ENST00000566331 1836 ntBASIC19.24■□□□□ 0.67
COL21A1Q96P44 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC19.24■□□□□ 0.67
COL21A1Q96P44 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC19.24■□□□□ 0.67
COL21A1Q96P44 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
COL21A1Q96P44 AL137784.2-201ENST00000607332 1000 ntBASIC19.24■□□□□ 0.67
COL21A1Q96P44 AC092666.2-201ENST00000613287 246 ntBASIC19.24■□□□□ 0.67
COL21A1Q96P44 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
COL21A1Q96P44 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
COL21A1Q96P44 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC19.24■□□□□ 0.67
COL21A1Q96P44 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC19.24■□□□□ 0.67
COL21A1Q96P44 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
COL21A1Q96P44 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
COL21A1Q96P44 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
COL21A1Q96P44 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
COL21A1Q96P44 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
COL21A1Q96P44 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
COL21A1Q96P44 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC19.23■□□□□ 0.67
COL21A1Q96P44 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
COL21A1Q96P44 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC19.23■□□□□ 0.67
COL21A1Q96P44 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
COL21A1Q96P44 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC19.23■□□□□ 0.67
COL21A1Q96P44 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC19.23■□□□□ 0.67
COL21A1Q96P44 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC19.23■□□□□ 0.67
COL21A1Q96P44 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC19.23■□□□□ 0.67
COL21A1Q96P44 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
COL21A1Q96P44 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
COL21A1Q96P44 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC19.23■□□□□ 0.67
COL21A1Q96P44 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC19.23■□□□□ 0.67
COL21A1Q96P44 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
COL21A1Q96P44 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
COL21A1Q96P44 EXOC3-AS1-202ENST00000623673 1663 ntBASIC19.23■□□□□ 0.67
COL21A1Q96P44 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
COL21A1Q96P44 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC19.23■□□□□ 0.67
COL21A1Q96P44 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
COL21A1Q96P44 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
COL21A1Q96P44 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
COL21A1Q96P44 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
COL21A1Q96P44 RNF165-205ENST00000588679 2904 ntBASIC19.22■□□□□ 0.67
COL21A1Q96P44 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
COL21A1Q96P44 GAS2L1P2-201ENST00000436355 1356 ntBASIC19.22■□□□□ 0.67
COL21A1Q96P44 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC19.22■□□□□ 0.67
COL21A1Q96P44 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC19.22■□□□□ 0.67
COL21A1Q96P44 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
COL21A1Q96P44 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
COL21A1Q96P44 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC19.22■□□□□ 0.67
COL21A1Q96P44 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC19.22■□□□□ 0.67
COL21A1Q96P44 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
COL21A1Q96P44 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC19.22■□□□□ 0.67
COL21A1Q96P44 BRI3-207ENST00000539286 699 ntTSL 2 BASIC19.22■□□□□ 0.67
COL21A1Q96P44 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC19.22■□□□□ 0.67
COL21A1Q96P44 BID-214ENST00000617586 542 ntTSL 5 BASIC19.22■□□□□ 0.67
COL21A1Q96P44 AC092437.1-201ENST00000624794 1048 ntBASIC19.22■□□□□ 0.67
COL21A1Q96P44 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC19.22■□□□□ 0.67
COL21A1Q96P44 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
COL21A1Q96P44 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
COL21A1Q96P44 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
COL21A1Q96P44 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
COL21A1Q96P44 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
COL21A1Q96P44 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
COL21A1Q96P44 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
COL21A1Q96P44 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC19.21■□□□□ 0.67
COL21A1Q96P44 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
COL21A1Q96P44 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
COL21A1Q96P44 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC19.21■□□□□ 0.67
COL21A1Q96P44 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC19.21■□□□□ 0.67
COL21A1Q96P44 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC19.21■□□□□ 0.67
COL21A1Q96P44 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC19.21■□□□□ 0.67
COL21A1Q96P44 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
COL21A1Q96P44 AC027702.1-201ENST00000563810 1770 ntBASIC19.21■□□□□ 0.67
COL21A1Q96P44 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
COL21A1Q96P44 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC19.21■□□□□ 0.67
COL21A1Q96P44 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
COL21A1Q96P44 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
COL21A1Q96P44 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC19.2■□□□□ 0.66
COL21A1Q96P44 FP700111.2-201ENST00000619190 1892 ntBASIC19.2■□□□□ 0.66
COL21A1Q96P44 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
COL21A1Q96P44 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC19.2■□□□□ 0.66
COL21A1Q96P44 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
COL21A1Q96P44 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
COL21A1Q96P44 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
COL21A1Q96P44 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC19.2■□□□□ 0.66
COL21A1Q96P44 AC245052.3-201ENST00000450182 901 ntBASIC19.2■□□□□ 0.66
COL21A1Q96P44 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC19.2■□□□□ 0.66
COL21A1Q96P44 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC19.2■□□□□ 0.66
COL21A1Q96P44 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
COL21A1Q96P44 MFSD11-216ENST00000590393 1141 ntBASIC19.2■□□□□ 0.66
COL21A1Q96P44 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC19.2■□□□□ 0.66
COL21A1Q96P44 AC011767.1-201ENST00000617410 1153 ntBASIC19.2■□□□□ 0.66
COL21A1Q96P44 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC19.2■□□□□ 0.66
COL21A1Q96P44 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
COL21A1Q96P44 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
COL21A1Q96P44 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
COL21A1Q96P44 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC19.2■□□□□ 0.66
COL21A1Q96P44 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC19.2■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 11.6 ms