Protein–RNA interactions for Protein: Q96NY8

NECTIN4, Nectin-4, humanhuman

Predictions only

Length 510 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN4Q96NY8 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC21.27■■□□□ 1
NECTIN4Q96NY8 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC21.27■■□□□ 1
NECTIN4Q96NY8 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC21.27■□□□□ 0.99
NECTIN4Q96NY8 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
NECTIN4Q96NY8 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC21.26■□□□□ 0.99
NECTIN4Q96NY8 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC21.26■□□□□ 0.99
NECTIN4Q96NY8 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC21.26■□□□□ 0.99
NECTIN4Q96NY8 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
NECTIN4Q96NY8 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
NECTIN4Q96NY8 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC21.26■□□□□ 0.99
NECTIN4Q96NY8 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
NECTIN4Q96NY8 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
NECTIN4Q96NY8 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
NECTIN4Q96NY8 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC21.26■□□□□ 0.99
NECTIN4Q96NY8 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC21.26■□□□□ 0.99
NECTIN4Q96NY8 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC21.26■□□□□ 0.99
NECTIN4Q96NY8 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC21.26■□□□□ 0.99
NECTIN4Q96NY8 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC21.26■□□□□ 0.99
NECTIN4Q96NY8 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC21.26■□□□□ 0.99
NECTIN4Q96NY8 AL590326.2-201ENST00000625139 305 ntBASIC21.26■□□□□ 0.99
NECTIN4Q96NY8 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC21.26■□□□□ 0.99
NECTIN4Q96NY8 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC21.26■□□□□ 0.99
NECTIN4Q96NY8 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
NECTIN4Q96NY8 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
NECTIN4Q96NY8 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
NECTIN4Q96NY8 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
NECTIN4Q96NY8 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
NECTIN4Q96NY8 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC21.25■□□□□ 0.99
NECTIN4Q96NY8 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
NECTIN4Q96NY8 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
NECTIN4Q96NY8 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
NECTIN4Q96NY8 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC21.25■□□□□ 0.99
NECTIN4Q96NY8 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC21.25■□□□□ 0.99
NECTIN4Q96NY8 KRT18P35-201ENST00000510488 1269 ntBASIC21.25■□□□□ 0.99
NECTIN4Q96NY8 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC21.25■□□□□ 0.99
NECTIN4Q96NY8 GRAP-204ENST00000573099 846 ntTSL 3 BASIC21.25■□□□□ 0.99
NECTIN4Q96NY8 AF186192.3-201ENST00000583427 947 ntBASIC21.25■□□□□ 0.99
NECTIN4Q96NY8 RPS15-203ENST00000586096 570 ntTSL 2 BASIC21.25■□□□□ 0.99
NECTIN4Q96NY8 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC21.25■□□□□ 0.99
NECTIN4Q96NY8 AL121829.2-201ENST00000620908 328 ntBASIC21.25■□□□□ 0.99
NECTIN4Q96NY8 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
NECTIN4Q96NY8 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
NECTIN4Q96NY8 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC21.25■□□□□ 0.99
NECTIN4Q96NY8 AC127496.7-201ENST00000625110 1798 ntBASIC21.25■□□□□ 0.99
NECTIN4Q96NY8 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
NECTIN4Q96NY8 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
NECTIN4Q96NY8 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
NECTIN4Q96NY8 FAM99A-202ENST00000538190 1989 ntBASIC21.25■□□□□ 0.99
NECTIN4Q96NY8 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
NECTIN4Q96NY8 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC21.24■□□□□ 0.99
NECTIN4Q96NY8 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
NECTIN4Q96NY8 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC21.24■□□□□ 0.99
NECTIN4Q96NY8 ARMC10P1-201ENST00000313754 855 ntBASIC21.24■□□□□ 0.99
NECTIN4Q96NY8 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
NECTIN4Q96NY8 KRT16P5-201ENST00000455284 522 ntBASIC21.24■□□□□ 0.99
NECTIN4Q96NY8 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC21.24■□□□□ 0.99
NECTIN4Q96NY8 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC21.24■□□□□ 0.99
NECTIN4Q96NY8 AC092865.7-201ENST00000641832 219 ntBASIC21.24■□□□□ 0.99
NECTIN4Q96NY8 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
NECTIN4Q96NY8 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
NECTIN4Q96NY8 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
NECTIN4Q96NY8 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC21.24■□□□□ 0.99
NECTIN4Q96NY8 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC21.24■□□□□ 0.99
NECTIN4Q96NY8 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
NECTIN4Q96NY8 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
NECTIN4Q96NY8 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
NECTIN4Q96NY8 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
NECTIN4Q96NY8 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
NECTIN4Q96NY8 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC21.23■□□□□ 0.99
NECTIN4Q96NY8 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
NECTIN4Q96NY8 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC21.23■□□□□ 0.99
NECTIN4Q96NY8 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC21.23■□□□□ 0.99
NECTIN4Q96NY8 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC21.23■□□□□ 0.99
NECTIN4Q96NY8 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC21.23■□□□□ 0.99
NECTIN4Q96NY8 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
NECTIN4Q96NY8 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
NECTIN4Q96NY8 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC21.23■□□□□ 0.99
NECTIN4Q96NY8 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC21.23■□□□□ 0.99
NECTIN4Q96NY8 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC21.23■□□□□ 0.99
NECTIN4Q96NY8 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
NECTIN4Q96NY8 HTR7P1-201ENST00000538670 1336 ntBASIC21.23■□□□□ 0.99
NECTIN4Q96NY8 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
NECTIN4Q96NY8 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC21.22■□□□□ 0.99
NECTIN4Q96NY8 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC21.22■□□□□ 0.99
NECTIN4Q96NY8 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
NECTIN4Q96NY8 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
NECTIN4Q96NY8 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
NECTIN4Q96NY8 AL049597.2-201ENST00000565575 961 ntBASIC21.22■□□□□ 0.99
NECTIN4Q96NY8 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC21.22■□□□□ 0.99
NECTIN4Q96NY8 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
NECTIN4Q96NY8 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
NECTIN4Q96NY8 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
NECTIN4Q96NY8 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
NECTIN4Q96NY8 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
NECTIN4Q96NY8 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
NECTIN4Q96NY8 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC21.21■□□□□ 0.99
NECTIN4Q96NY8 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
NECTIN4Q96NY8 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC21.21■□□□□ 0.99
NECTIN4Q96NY8 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC21.21■□□□□ 0.99
NECTIN4Q96NY8 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC21.21■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 36.6 ms